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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 4,028 4,028 -
BioSample 118,679 118,679 -
Conserved Domains 2 2 -
GEO DataSets 53,805 53,805 -
Gene 121,387 121,387 -
Identical Protein Groups 85,057 85,057 -
Nucleotide 1,954,109 1,954,109 -
PubChem BioAssay 2,196 2,196 -
PMC 27,653 27,653 -
Protein 126,547 126,547 -
SRA 153,756 153,756 -
Structure 633 633 -
Taxonomy 1 1 -

Danio rerio

Taxonomy ID: 7955 (for references in articles please use NCBI:txid7955)
current name
Danio rerio  (Hamilton, 1822)
homotypic synonym:
Brachydanio rerio
basionym:
Cyprinus rerio  Hamilton, 1822
Genbank common name: zebrafish
NCBI BLAST name: ray-finned fishes
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Other names:
heterotypic synonym Danio frankei
heterotypic synonym Danio rerio frankei
heterotypic synonym Brachydanio rerio frankei
common name(s) leopard danio, zebra fish, zebra danio

Lineage(full)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Otomorpha; Ostariophysi; Otophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Danionidae; Danioninae; Danio

Comments and References:

image:Danio rerio
Image by Azul from Wikimedia Commons under a Public Domain license.
* Image may not have been verified for accuracy by NCBI Taxonomy.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
DNA barcoding : Danio rerio taxonomy/phylogenetic Barcodes of Life
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
GOLD: 11 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
639469800: Danio rerio Tuebingen organism-specific Integrated Microbial Genomes
Danio rerio (Hamilton, 1822) taxonomy/phylogenetic Integrated Taxonomic Information System
Danio rerio taxonomy/phylogenetic Lifemap
Zebrafish Model Organism Database taxonomy/phylogenetic NCBI taxonomy bookmarks
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Cyprinus rerio Hamilton, 1822 taxonomy/phylogenetic Ocean Biogeographic Information System
plazi taxonomy/phylogenetic Plazi
plazi taxonomy/phylogenetic Plazi
UCSCgb sequence screening/similarity/alignment UCSC Genome Browser
WebScipio: Brachydanio rerio str. Tuebingen organism-specific WebScipio - eukaryotic gene identification
WebScipio: Brachydanio rerio organism-specific WebScipio - eukaryotic gene identification
Danio rerio (Hamilton, 1822) taxonomy/phylogenetic World Register of Marine Species
Brachydanio rerio (Hamilton, 1822) taxonomy/phylogenetic World Register of Marine Species
Danio frankei (Meinken, 1963) taxonomy/phylogenetic World Register of Marine Species
Cyprinus rerio Hamilton, 1822 taxonomy/phylogenetic World Register of Marine Species
diArk: Brachydanio rerio organism-specific diArk - a resource for eukaryotic genome research
diArk: Brachydanio rerio str. CG2 organism-specific diArk - a resource for eukaryotic genome research
diArk: Brachydanio rerio str. Tuebingen organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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