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HC18989.HIFIRW.ONTUL.na.chrY

Organism name:
Homo sapiens (human)
BioSample:
SAMEA115526423
BioProject:
PRJEB58376
Submitter:
THE JACKSON LABORATORY
Date:
2024/04/28
Assembly level:
Chromosome
Genome representation:
partial
Excluded from RefSeq:
  • missing metadata
  • partial
GenBank assembly accession:
GCA_964035215.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
Assembly method:
Verkko v1.0
Genome coverage:
30x
Sequencing technology:
PacBio-Sequel II; ONT-UL:PromethION

IDs: 22458541 [UID] 57026598 [GenBank]

See Genome Information for Homo sapiens

Pathogen Detection Resources

There are 1137 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length71,354,701
Total ungapped length71,354,701
Gaps between scaffolds0
Number of scaffolds44
Scaffold N5010,639,436
Scaffold L503
Number of contigs44
Contig N5010,639,436
Contig L503
Total number of chromosomes and plasmids44
Number of component sequences (WGS or clone)44

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_964035214.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome contig-1OZ036924.1n/an/a
Chromosome contig-2OZ036925.1n/an/a
Chromosome contig-3OZ036926.1n/an/a
Chromosome contig-4OZ036927.1n/an/a
Chromosome contig-5OZ036928.1n/an/a
Chromosome contig-6OZ036929.1n/an/a
Chromosome contig-7OZ036930.1n/an/a
Chromosome contig-8OZ036931.1n/an/a
Chromosome contig-9OZ036932.1n/an/a
Chromosome contig-10OZ036933.1n/an/a
Chromosome contig-11OZ036934.1n/an/a
Chromosome contig-12OZ036935.1n/an/a
Chromosome contig-13OZ036936.1n/an/a
Chromosome contig-14OZ036937.1n/an/a
Chromosome contig-15OZ036938.1n/an/a
Chromosome contig-16OZ036939.1n/an/a
Chromosome contig-17OZ036940.1n/an/a
Chromosome contig-18OZ036941.1n/an/a
Chromosome contig-19OZ036942.1n/an/a
Chromosome contig-20OZ036943.1n/an/a
Chromosome contig-21OZ036944.1n/an/a
Chromosome contig-22OZ036945.1n/an/a
Chromosome contig-23OZ036946.1n/an/a
Chromosome contig-24OZ036947.1n/an/a
Chromosome contig-25OZ036948.1n/an/a
Chromosome contig-26OZ036949.1n/an/a
Chromosome contig-27OZ036950.1n/an/a
Chromosome contig-28OZ036951.1n/an/a
Chromosome contig-29OZ036952.1n/an/a
Chromosome contig-30OZ036953.1n/an/a
Chromosome contig-31OZ036954.1n/an/a
Chromosome contig-32OZ036955.1n/an/a
Chromosome contig-33OZ036956.1n/an/a
Chromosome contig-34OZ036957.1n/an/a
Chromosome contig-35OZ036958.1n/an/a
Chromosome contig-36OZ036959.1n/an/a
Chromosome contig-37OZ036960.1n/an/a
Chromosome contig-38OZ036961.1n/an/a
Chromosome contig-39OZ036962.1n/an/a
Chromosome contig-40OZ036963.1n/an/a
Chromosome contig-41OZ036964.1n/an/a
Chromosome contig-42OZ036965.1n/an/a
Chromosome contig-43OZ036966.1n/an/a
Chromosome contig-44OZ036967.1n/an/a

Assembly statistics

MoleculeTotal
Length
All71,354,701
Chromosome contig-110,639,436
Chromosome contig-2364,886
Chromosome contig-3127,980
Chromosome contig-4143,048
Chromosome contig-554,755
Chromosome contig-666,639
Chromosome contig-770,814
Chromosome contig-858,252
Chromosome contig-967,679
Chromosome contig-10104,504
Chromosome contig-1154,854
Chromosome contig-1219,442
Chromosome contig-1332,255
Chromosome contig-1430,770
Chromosome contig-1541,643
Chromosome contig-1638,411
Chromosome contig-1728,134
Chromosome contig-1839,204
Chromosome contig-1935,858
Chromosome contig-2021,309
Chromosome contig-2129,778
Chromosome contig-2234,168
Chromosome contig-2330,291
Chromosome contig-2423,139
Chromosome contig-2512,820,453
Chromosome contig-265,214,003
Chromosome contig-2768,295
Chromosome contig-285,362,648
Chromosome contig-2918,188,533
Chromosome contig-30163,527
Chromosome contig-313,170,613
Chromosome contig-323,185,497
Chromosome contig-3316,296
Chromosome contig-342,073,369
Chromosome contig-35165,163
Chromosome contig-368,881
Chromosome contig-3715,980
Chromosome contig-38113,438
Chromosome contig-39148,959
Chromosome contig-40150,000
Chromosome contig-4112,595
Chromosome contig-4223,331
Chromosome contig-4321,848
Chromosome contig-448,274,023