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Source database (GenBank or RefSeq) File type

HG03471.HIFIRW.ONTUL.na.chrY

Organism name:

Homo sapiens (human)

BioSample:

SAMEA115526412

BioProject:

PRJEB58376

Submitter:

THE JACKSON LABORATORY

Date:

2024/04/28

Assembly level:

Chromosome

Genome representation:

partial

Excluded from RefSeq:

missing metadata
partial

GenBank assembly accession:

GCA_964035305.1 (latest)

RefSeq assembly accession:

n/a

RefSeq assembly and GenBank assembly identical:

n/a

Assembly method:

Verkko v1.0

Genome coverage:

50x

Sequencing technology:

PacBio-Sequel II; ONT-UL:PromethION

IDs: 22458731 [UID] 57027018 [GenBank]

See Genome Information for Homo sapiens

Pathogen Detection Resources

There are 1137 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_964035305.1	n/a	n/a	HG03471.HIFIRW.ONTUL.na.chrY	Chromosome	Latest GenBank

Comment

Global statistics

Total sequence length	62,343,843
Total ungapped length	62,343,843
Gaps between scaffolds	0
Number of scaffolds	23
Scaffold N50	9,584,566
Scaffold L50	2
Number of contigs	23
Contig N50	9,584,566
Contig L50	2
Total number of chromosomes and plasmids	23
Number of component sequences (WGS or clone)	23

Molecule name	GenBank sequence		RefSeq sequence
Chromosome contig-1	OZ036366.1	n/a	n/a
Chromosome contig-2	OZ036367.1	n/a	n/a
Chromosome contig-3	OZ036368.1	n/a	n/a
Chromosome contig-4	OZ036369.1	n/a	n/a
Chromosome contig-5	OZ036370.1	n/a	n/a
Chromosome contig-6	OZ036371.1	n/a	n/a
Chromosome contig-7	OZ036372.1	n/a	n/a
Chromosome contig-8	OZ036373.1	n/a	n/a
Chromosome contig-9	OZ036374.1	n/a	n/a
Chromosome contig-10	OZ036375.1	n/a	n/a
Chromosome contig-11	OZ036376.1	n/a	n/a
Chromosome contig-12	OZ036377.1	n/a	n/a
Chromosome contig-13	OZ036378.1	n/a	n/a
Chromosome contig-14	OZ036379.1	n/a	n/a
Chromosome contig-15	OZ036380.1	n/a	n/a
Chromosome contig-16	OZ036381.1	n/a	n/a
Chromosome contig-17	OZ036382.1	n/a	n/a
Chromosome contig-18	OZ036383.1	n/a	n/a
Chromosome contig-19	OZ036384.1	n/a	n/a
Chromosome contig-20	OZ036385.1	n/a	n/a
Chromosome contig-21	OZ036386.1	n/a	n/a
Chromosome contig-22	OZ036387.1	n/a	n/a
Chromosome contig-23	OZ036388.1	n/a	n/a

Molecule	Total Length
All	62,343,843
Chromosome contig-1	1,432,229
Chromosome contig-2	892,712
Chromosome contig-3	9,414,903
Chromosome contig-4	25,087,225
Chromosome contig-5	22,126
Chromosome contig-6	260,283
Chromosome contig-7	31,889
Chromosome contig-8	9,584,566
Chromosome contig-9	268,782
Chromosome contig-10	140,994
Chromosome contig-11	5,691,033
Chromosome contig-12	888,112
Chromosome contig-13	33,145
Chromosome contig-14	65,479
Chromosome contig-15	902,354
Chromosome contig-16	261,994
Chromosome contig-17	30,626
Chromosome contig-18	347,130
Chromosome contig-19	374,155
Chromosome contig-20	40,557
Chromosome contig-21	6,338,767
Chromosome contig-22	64,260
Chromosome contig-23	170,522

Assembly

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HG03471.HIFIRW.ONTUL.na.chrY

See Genome Information for Homo sapiens

Pathogen Detection Resources

There are 1137 assemblies for this organism

History (Show revision history)

Comment

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