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Source database (GenBank or RefSeq) File type

HG01243.HIFIRW.ONTUL.na.chrY

Organism name:

Homo sapiens (human)

BioSample:

SAMEA115526429

BioProject:

PRJEB58376

Submitter:

THE JACKSON LABORATORY

Date:

2024/04/28

Assembly level:

Chromosome

Genome representation:

partial

Excluded from RefSeq:

missing metadata
partial

GenBank assembly accession:

GCA_964035415.1 (latest)

RefSeq assembly accession:

n/a

RefSeq assembly and GenBank assembly identical:

n/a

Assembly method:

Verkko v1.0

Genome coverage:

35x

Sequencing technology:

PacBio-Sequel II; ONT-UL:PromethION

IDs: 22458521 [UID] 57026538 [GenBank]

See Genome Information for Homo sapiens

Pathogen Detection Resources

There are 1137 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_964035415.1	n/a	n/a	HG01243.HIFIRW.ONTUL.na.chrY	Chromosome	Latest GenBank

Comment

Global statistics

Total sequence length	45,229,202
Total ungapped length	45,229,202
Gaps between scaffolds	0
Number of scaffolds	23
Scaffold N50	10,416,792
Scaffold L50	2
Number of contigs	23
Contig N50	10,416,792
Contig L50	2
Total number of chromosomes and plasmids	23
Number of component sequences (WGS or clone)	23

Molecule name	GenBank sequence		RefSeq sequence
Chromosome contig-1	OZ037146.1	n/a	n/a
Chromosome contig-2	OZ037147.1	n/a	n/a
Chromosome contig-3	OZ037148.1	n/a	n/a
Chromosome contig-4	OZ037149.1	n/a	n/a
Chromosome contig-5	OZ037150.1	n/a	n/a
Chromosome contig-6	OZ037151.1	n/a	n/a
Chromosome contig-7	OZ037152.1	n/a	n/a
Chromosome contig-8	OZ037153.1	n/a	n/a
Chromosome contig-9	OZ037154.1	n/a	n/a
Chromosome contig-10	OZ037155.1	n/a	n/a
Chromosome contig-11	OZ037156.1	n/a	n/a
Chromosome contig-12	OZ037157.1	n/a	n/a
Chromosome contig-13	OZ037158.1	n/a	n/a
Chromosome contig-14	OZ037159.1	n/a	n/a
Chromosome contig-15	OZ037160.1	n/a	n/a
Chromosome contig-16	OZ037161.1	n/a	n/a
Chromosome contig-17	OZ037162.1	n/a	n/a
Chromosome contig-18	OZ037163.1	n/a	n/a
Chromosome contig-19	OZ037164.1	n/a	n/a
Chromosome contig-20	OZ037165.1	n/a	n/a
Chromosome contig-21	OZ037166.1	n/a	n/a
Chromosome contig-22	OZ037167.1	n/a	n/a
Chromosome contig-23	OZ037168.1	n/a	n/a

Molecule	Total Length
All	45,229,202
Chromosome contig-1	961,539
Chromosome contig-2	833,878
Chromosome contig-3	950,099
Chromosome contig-4	345,108
Chromosome contig-5	381,810
Chromosome contig-6	193,850
Chromosome contig-7	344,254
Chromosome contig-8	16,083,112
Chromosome contig-9	80,937
Chromosome contig-10	734,182
Chromosome contig-11	10,416,792
Chromosome contig-12	4,787,577
Chromosome contig-13	66,619
Chromosome contig-14	106,083
Chromosome contig-15	34,545
Chromosome contig-16	47,116
Chromosome contig-17	442,231
Chromosome contig-18	294,917
Chromosome contig-19	19,620
Chromosome contig-20	1,322,802
Chromosome contig-21	37,991
Chromosome contig-22	98,153
Chromosome contig-23	6,645,987

Assembly

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Download Assembly

HG01243.HIFIRW.ONTUL.na.chrY

See Genome Information for Homo sapiens

Pathogen Detection Resources

There are 1137 assemblies for this organism

History (Show revision history)

Comment

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