At the top of the CDART results page in a yellow box, the query sequence CDs are represented as “beads on a string”. Each CD had a unique color and shape and is labeled both in the display itself and in a legend located at the bottom of the page. The shapes representing CDs are hyperlinked to the corresponding CD summary page. The matching proteins to the query are listed below the yellow box, ranked according to the number of non-redundant hits to the domains in the query sequence. Each match is either a single protein, in which case its Accession number is shown, or is a cluster of very similar proteins, in which case the number of members in the cluster is shown. Cluster members can be displayed by selecting the logo to the left of its diagram. Selecting any protein Accession number displays the flatfile for that protein. To the right of any drawing for a single protein (either on the main results page or after expanding a protein cluster) is a more> link, which displays the CD-Search results page for the selected protein so that the sequence alignment, e.g., of a CDART hit with a CD contained in the original protein of interest, can be examined.