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Items: 17

1.

Genome-wide maps of chromatin state in NCCIT cells

(Submitter supplied) H2B mono-ubiquitylation is required for multiple methylations of both H3K4 and H3K79 and has been implicated in gene expression from yeast to human. However, molecular crosstalk between H2BUb1 and other modifications, especially H3K4 and H3K79 methylations, remains unclear in vertebrates. To understand the functional role of H2BUb1, genome-wide histone modification patterns were measured in human cells. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platforms:
GPL11154 GPL9052
14 Samples
Download data: BED, SAM, TXT
Series
Accession:
GSE25882
ID:
200025882

PubMed Full text in PMC Similar studies Analyze with GEO2RSRA Run Selector

2.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10400 Series
180082 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

3.

Illumina Genome Analyzer (Homo sapiens)

Organism:
Homo sapiens
586 Series
7896 Samples
Download data
Platform
Accession:
GPL9052
ID:
100009052

4.

NCC-Rb-WT paired-end seq

Organism:
Homo sapiens
Source name:
NCCIT
Platform:
GPL11154
Series:
GSE25882
Download data: BED
Sample
Accession:
GSM855979
ID:
300855979

SRA Run Selector

5.

NCC-Rb-Rsi paired-end seq

Organism:
Homo sapiens
Source name:
NCCIT
Platform:
GPL11154
Series:
GSE25882
Download data: BED
Sample
Accession:
GSM855978
ID:
300855978

SRA Run Selector

6.

NCC-Rb-Esi paired-end seq

Organism:
Homo sapiens
Source name:
NCCIT
Platform:
GPL11154
Series:
GSE25882
Download data: BED
Sample
Accession:
GSM855977
ID:
300855977

SRA Run Selector

7.

NCCIT-siRNF20_mRNA_seq

Organism:
Homo sapiens
Source name:
siRNF20-transfected NCCIT cells, mRNA
Platform:
GPL9052
Series:
GSE25882
Download data: SAM
Sample
Accession:
GSM773078
ID:
300773078

SRA Run Selector

8.

NCCIT_mRNA_seq

Organism:
Homo sapiens
Source name:
NCCIT, mRNA
Platform:
GPL9052
Series:
GSE25882
Download data: SAM
Sample
Accession:
GSM644996
ID:
300644996

SRA Run Selector

9.

H3ac_ChIP-seq

Organism:
Homo sapiens
Source name:
NCCIT, H3Kac ChIP
Platform:
GPL9052
Series:
GSE25882
Download data: BED
Sample
Accession:
GSM644995
ID:
300644995

SRA Run Selector

10.

H3K79me3_ChIP-seq

Organism:
Homo sapiens
Source name:
NCCIT, H3K79me3 ChIP
Platform:
GPL9052
Series:
GSE25882
Download data: BED
Sample
Accession:
GSM644994
ID:
300644994

SRA Run Selector

11.

H3K79me2_ChIP-seq

Organism:
Homo sapiens
Source name:
NCCIT, H3K79me2 ChIP
Platform:
GPL9052
Series:
GSE25882
Download data: BED
Sample
Accession:
GSM644993
ID:
300644993

SRA Run Selector

12.

H3K79me1_ChIP_seq

Organism:
Homo sapiens
Source name:
NCCIT, H3K79me1 ChIP
Platform:
GPL9052
Series:
GSE25882
Download data: BED
Sample
Accession:
GSM644992
ID:
300644992

SRA Run Selector

13.

H3K36me3_ChIP-seq

Organism:
Homo sapiens
Source name:
NCCIT, H3K36me3 ChIP
Platform:
GPL9052
Series:
GSE25882
Download data: BED
Sample
Accession:
GSM644991
ID:
300644991

SRA Run Selector

14.

H3K4me3_ChIP-seq

Organism:
Homo sapiens
Source name:
NCCIT, H3K4me3 ChIP
Platform:
GPL9052
Series:
GSE25882
Download data: BED
Sample
Accession:
GSM644990
ID:
300644990

SRA Run Selector

15.

H2BUb1_ChIP-seq

Organism:
Homo sapiens
Source name:
NCCIT, H2BUb1 ChIP
Platform:
GPL9052
Series:
GSE25882
Download data: BED
Sample
Accession:
GSM644989
ID:
300644989

SRA Run Selector

16.

MNase-seq

Organism:
Homo sapiens
Source name:
NCCIT, MNase
Platform:
GPL9052
Series:
GSE25882
Download data: BED
Sample
Accession:
GSM644988
ID:
300644988

SRA Run Selector

17.

Input DNA

Organism:
Homo sapiens
Source name:
NCCIT, input
Platform:
GPL9052
Series:
GSE25882
Download data: BED
Sample
Accession:
GSM644987
ID:
300644987

SRA Run Selector

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