U.S. flag

An official website of the United States government

Format
Items per page
Sort by

Send to:

Choose Destination

Search results

Items: 9

1.

Genome-wide maps of H3K4me2 and DNase I hypersensitivity sites in prostate cancer cell line LNCaP and breast cancer cell line MCF-7.

(Submitter supplied) We report the high-throughput profiling of histone modification and DNase I hypersensitivity sites in prostate cancer and breaset cancer cells. We found that while AR binding is associated with nucleosome depletion, ER binding is not. We showed that a quantitative measure of DNase I hypersensitivity changes is a powerful tool in indentifying transcription factor cistromes.
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL9052 GPL11154
6 Samples
Download data: BED
Series
Accession:
GSE33216
ID:
200033216

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10400 Series
180082 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

3.

Illumina Genome Analyzer (Homo sapiens)

Organism:
Homo sapiens
586 Series
7896 Samples
Download data
Platform
Accession:
GPL9052
ID:
100009052

4.

MCF-7 E2 DNaseI

Organism:
Homo sapiens
Source name:
breast cancer cells
Platform:
GPL9052
Series:
GSE33216
Download data: BED
Sample
Accession:
GSM822390
ID:
300822390

SRA Run Selector

5.

MCF-7 E2 H3K4me2

Organism:
Homo sapiens
Source name:
breast cancer cells
Platform:
GPL11154
Series:
GSE33216
Download data: BED
Sample
Accession:
GSM822392
ID:
300822392

SRA Run Selector

6.

MCF-7 vehicle DNaseI

Organism:
Homo sapiens
Source name:
breast cancer cells
Platform:
GPL9052
Series:
GSE33216
Download data: BED
Sample
Accession:
GSM822389
ID:
300822389

SRA Run Selector

7.

LNCaP DHT DNaseI

Organism:
Homo sapiens
Source name:
prostate cancer cells
Platform:
GPL9052
Series:
GSE33216
Download data: BED
Sample
Accession:
GSM822388
ID:
300822388

SRA Run Selector

8.

MCF-7 vehicle H3K4me2

Organism:
Homo sapiens
Source name:
breast cancer cells
Platform:
GPL11154
Series:
GSE33216
Download data: BED
Sample
Accession:
GSM822391
ID:
300822391

SRA Run Selector

9.

LNCaP vehicle DNaseI

Organism:
Homo sapiens
Source name:
prostate cancer cells
Platform:
GPL9052
Series:
GSE33216
Download data: BED
Sample
Accession:
GSM822387
ID:
300822387

SRA Run Selector

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Filters: Manage Filters

db=gds|term=GSE33216[Accession]|query=1|qty=2|blobid=MCID_66432ca3ec958f7d1001eebc|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
   Taxonomic Groups  [List]
Tree placeholder
    Top Organisms  [Tree]

Find related data

Search details

See more...

Important Links

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > Genes & Expression > Gene Expression Omnibus (GEO) Datasets
Support Center