GSE34394[Accession] - GEO DataSets - NCBI

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Select item 2000343941.

Three Distinct Phases of Regeneration-Specific Gene Expression in the Axolotl Blastema

(Submitter supplied) The salamander has the remarkable ability to regenerate its limb after amputation. Cells at the site of amputation form a blastema and then proliferate and differentiate to regrow the limb. To better understand this process, we have performed deep RNA sequencing of the blastema over a time course. We find genes expressed in three phases with a prominent burst in oncogene expression during the first day, blastemal/limb bud genes peaking at 7 to 14 days, and markers for terminal differentiation upregulated later. more...

Organism:: Ambystoma mexicanum; Mus musculus

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL11002 GPL14997
20 Samples

Download data: TXT

Series

Accession:: GSE34394

ID:: 200034394

SRA Run Selector

Select item 1000149972.

Illumina Genome Analyzer IIx (Ambystoma mexicanum)

Organism:: Ambystoma mexicanum

2 Series
20 Samples

Platform

Accession:: GPL14997

ID:: 100014997

Select item 1000110023.

Illumina Genome Analyzer IIx (Mus musculus)

Organism:: Mus musculus

895 Series
7710 Samples

Platform

Accession:: GPL11002

ID:: 100011002

Select item 3008481974.

Mouse digit 14d

Organism:: Mus musculus

Source name:: mouse tissue

Platform:: GPL11002
Series:: GSE34394

Download data: TXT

Sample

Accession:: GSM848197

ID:: 300848197

SRA Run Selector

Select item 3008481965.

Mouse digit 10d

Organism:: Mus musculus

Source name:: mouse tissue

Platform:: GPL11002
Series:: GSE34394

Download data: TXT

Sample

Accession:: GSM848196

ID:: 300848196

SRA Run Selector

Select item 3008481956.

Organism:: Mus musculus

Source name:: mouse tissue

Platform:: GPL11002
Series:: GSE34394

Download data: TXT

Sample

Accession:: GSM848195

ID:: 300848195

SRA Run Selector

Select item 3008481947.

Organism:: Mus musculus

Source name:: mouse tissue

Platform:: GPL11002
Series:: GSE34394

Download data: TXT

Sample

Accession:: GSM848194

ID:: 300848194

SRA Run Selector

Select item 3008481938.

Mouse digit 12hr

Organism:: Mus musculus

Source name:: mouse tissue

Platform:: GPL11002
Series:: GSE34394

Download data: TXT

Sample

Accession:: GSM848193

ID:: 300848193

SRA Run Selector

Select item 3008481929.

Mouse digit 6hr

Organism:: Mus musculus

Source name:: mouse tissue

Platform:: GPL11002
Series:: GSE34394

Download data: TXT

Sample

Accession:: GSM848192

ID:: 300848192

SRA Run Selector

Select item 30084819110.

Mouse digit 3hr

Organism:: Mus musculus

Source name:: mouse tissue

Platform:: GPL11002
Series:: GSE34394

Download data: TXT

Sample

Accession:: GSM848191

ID:: 300848191

SRA Run Selector

Select item 30084819011.

Mouse digit 0hr

Organism:: Mus musculus

Source name:: mouse tissue

Platform:: GPL11002
Series:: GSE34394

Download data: TXT

Sample

Accession:: GSM848190

ID:: 300848190

SRA Run Selector

Select item 30084820912.

Axolotl limb blastemal 28d

Organism:: Ambystoma mexicanum

Source name:: axolotl juvenile blastema

Platform:: GPL14997
Series:: GSE34394

Download data: TXT

Sample

Accession:: GSM848209

ID:: 300848209

SRA Run Selector

Select item 30084820813.

Axolotl limb blastemal 21d

Organism:: Ambystoma mexicanum

Source name:: axolotl juvenile blastema

Platform:: GPL14997
Series:: GSE34394

Download data: TXT

Sample

Accession:: GSM848208

ID:: 300848208

SRA Run Selector

Select item 30084820714.

Axolotl limb blastemal 14d

Organism:: Ambystoma mexicanum

Source name:: axolotl juvenile blastema

Platform:: GPL14997
Series:: GSE34394

Download data: TXT

Sample

Accession:: GSM848207

ID:: 300848207

SRA Run Selector

Select item 30084820615.

Axolotl limb blastemal 10d

Organism:: Ambystoma mexicanum

Source name:: axolotl juvenile blastema

Platform:: GPL14997
Series:: GSE34394

Download data: TXT

Sample

Accession:: GSM848206

ID:: 300848206

SRA Run Selector

Select item 30084820516.

Axolotl limb blastemal 7d

Organism:: Ambystoma mexicanum

Source name:: axolotl juvenile blastema

Platform:: GPL14997
Series:: GSE34394

Download data: TXT

Sample

Accession:: GSM848205

ID:: 300848205

SRA Run Selector

Select item 30084820417.

Axolotl limb blastemal 5d

Organism:: Ambystoma mexicanum

Source name:: axolotl juvenile blastema

Platform:: GPL14997
Series:: GSE34394

Download data: TXT

Sample

Accession:: GSM848204

ID:: 300848204

SRA Run Selector

Select item 30084820318.

Axolotl limb blastemal 3d

Organism:: Ambystoma mexicanum

Source name:: axolotl juvenile blastema

Platform:: GPL14997
Series:: GSE34394

Download data: TXT

Sample

Accession:: GSM848203

ID:: 300848203

SRA Run Selector

Select item 30084820219.

Axolotl limb blastemal 1d

Organism:: Ambystoma mexicanum

Source name:: axolotl juvenile blastema

Platform:: GPL14997
Series:: GSE34394

Download data: TXT

Sample

Accession:: GSM848202

ID:: 300848202

SRA Run Selector

Select item 30084820120.

Axolotl limb blastemal 12hr

Organism:: Ambystoma mexicanum

Source name:: axolotl juvenile blastema

Platform:: GPL14997
Series:: GSE34394

Download data: TXT

Sample

Accession:: GSM848201

ID:: 300848201

SRA Run Selector

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