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Items: 12

1.

Conserved Topological Domains in Mammalian Genomes Identified by High-resolution Analysis of Chromatin Interactions

(Submitter supplied) The spatial organization of the genome is intimately linked to its biological function, yet our understanding of higher order genomic structure is limited. Here we present high-resolution analyses of chromosomal organization in pluripotent and differentiated human and murine cell types determined using the Hi-C technique. We find that the mammalian genome is composed of over 1000 topological domains, which are stable among different cell types and highly conserved across species. more...
Organism:
Homo sapiens; Mus musculus
Type:
Other
Platforms:
GPL11154 GPL13112
9 Samples
Download data: TXT
Series
Accession:
GSE35156
ID:
200035156

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Mus musculus)

Organism:
Mus musculus
8223 Series
187245 Samples
Download data
Platform
Accession:
GPL13112
ID:
100013112

3.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10398 Series
180072 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

4.

RenLab-HiC-cortex, replicate two

Organism:
Mus musculus
Source name:
Mouse ES
Platform:
GPL13112
Series:
GSE35156
Download data
Sample
Accession:
GSM892305
ID:
300892305

SRA Run Selector

5.

RenLab-HiC-cortex, replicate one

Organism:
Mus musculus
Source name:
Mouse ES
Platform:
GPL13112
Series:
GSE35156
Download data
Sample
Accession:
GSM892304
ID:
300892304

SRA Run Selector

6.

RenLab-HiC-mESC-NCoI

Organism:
Mus musculus
Source name:
Mouse ES
Platform:
GPL13112
Series:
GSE35156 GSE51334
Download data
Sample
Accession:
GSM862722
ID:
300862722

SRA Run Selector

7.

RenLab-HiC-mESC-HindIII, replicate two

Organism:
Mus musculus
Source name:
Mouse ES
Platform:
GPL13112
Series:
GSE35156 GSE51334
Download data
Sample
Accession:
GSM862721
ID:
300862721

SRA Run Selector

8.

RenLab-HiC-mESC-HindIII, replicate one

Organism:
Mus musculus
Source name:
Mouse ES
Platform:
GPL13112
Series:
GSE35156 GSE51334
Download data
Sample
Accession:
GSM862720
ID:
300862720

SRA Run Selector

9.

RenLab-HiC-IMR90, replicate two

Organism:
Homo sapiens
Source name:
Human IMR90
Platform:
GPL11154
Series:
GSE35156 GSE51334
Download data
Sample
Accession:
GSM892307
ID:
300892307

SRA Run Selector

10.

RenLab-HiC-hESC, replicate two

Organism:
Homo sapiens
Source name:
Human ES
Platform:
GPL11154
Series:
GSE35156 GSE51334
Download data
Sample
Accession:
GSM892306
ID:
300892306

SRA Run Selector

11.

RenLab-HiC-IMR90, replicate one

Organism:
Homo sapiens
Source name:
Human IMR90
Platform:
GPL11154
Series:
GSE35156 GSE51334
Download data
Sample
Accession:
GSM862724
ID:
300862724

SRA Run Selector

12.

RenLab-HiC-hESC, replicate one

Organism:
Homo sapiens
Source name:
Human ES
Platform:
GPL11154
Series:
GSE35156 GSE51334
Download data
Sample
Accession:
GSM862723
ID:
300862723

SRA Run Selector

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db=gds|term=GSE35156[Accession]|query=1|qty=3|blobid=MCID_6642a9335f31ac4911733693|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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