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Items: 20

1.

Genome-wide profiling of target genes for the systemic lupus erythematosus-associated transcription factors IRF5 and STAT4

(Submitter supplied) IRF5 and STAT4 are strongly associated with human systemic lupus erythematosus (SLE). By performing chromatin immunoprecipitation-sequencing (ChIP-Seq) in human peripheral blood mononuclear cells (PBMCs), we identified more than 7000 target genes for IRF5 and STAT4 in stimulated PBMCs. Contrarily, without stimulation IRF5 seemed to be inactive, and STAT4 only showed low levels of transcriptional regulatory activity.
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL11154 GPL9115 GPL10999
16 Samples
Download data: TXT
Series
Accession:
GSE38567
ID:
200038567

PubMed Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10400 Series
180082 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

3.

Illumina Genome Analyzer IIx (Homo sapiens)

Organism:
Homo sapiens
1096 Series
9927 Samples
Download data
Platform
Accession:
GPL10999
ID:
100010999

4.

Illumina Genome Analyzer II (Homo sapiens)

Organism:
Homo sapiens
753 Series
6113 Samples
Download data
Platform
Accession:
GPL9115
ID:
100009115

5.

Combined immunoprecipitated DNA from Blood Donor No.1,2,3_non-stimulated PBMCs_Control IgG ChIP-Seq

Organism:
Homo sapiens
Source name:
Combined IP DNA_non-stimulated PBMCs_Control IgG ChIP-Seq
Platform:
GPL9115
Series:
GSE38567
Download data
Sample
Accession:
GSM945613
ID:
300945613

SRA Run Selector

6.

Blood Donor No.3_non-stimulated PBMCs_STAT4 ChIP-Seq

Organism:
Homo sapiens
Source name:
non-stimulated PBMCs_STAT4 ChIP-Seq
Platform:
GPL9115
Series:
GSE38567
Download data
Sample
Accession:
GSM945608
ID:
300945608

SRA Run Selector

7.

Blood Donor No.2_non-stimulated PBMCs_STAT4 ChIP-Seq

Organism:
Homo sapiens
Source name:
non-stimulated PBMCs_STAT4 ChIP-Seq
Platform:
GPL9115
Series:
GSE38567
Download data
Sample
Accession:
GSM945607
ID:
300945607

SRA Run Selector

8.

Blood Donor No.1_non-stimulated PBMCs_STAT4 ChIP-Seq

Organism:
Homo sapiens
Source name:
non-stimulated PBMCs_STAT4 ChIP-Seq
Platform:
GPL9115
Series:
GSE38567
Download data
Sample
Accession:
GSM945606
ID:
300945606

SRA Run Selector

9.

Blood Donor No.3_non-stimulated PBMCs_IRF5 ChIP-Seq

Organism:
Homo sapiens
Source name:
non-stimulated PBMCs_IRF5 ChIP-Seq
Platform:
GPL9115
Series:
GSE38567
Download data
Sample
Accession:
GSM945601
ID:
300945601

SRA Run Selector

10.

Blood Donor No.2_non-stimulated PBMCs_IRF5 ChIP-Seq

Organism:
Homo sapiens
Source name:
non-stimulated PBMCs_IRF5 ChIP-Seq
Platform:
GPL9115
Series:
GSE38567
Download data
Sample
Accession:
GSM945599
ID:
300945599

SRA Run Selector

11.

Blood Donor No.1_non-stimulated PBMCs_IRF5 ChIP-Seq

Organism:
Homo sapiens
Source name:
non-stimulated PBMCs_IRF5 ChIP-Seq
Platform:
GPL9115
Series:
GSE38567
Download data
Sample
Accession:
GSM945598
ID:
300945598

SRA Run Selector

12.

Blood Donor No.5_stimulated PBMCs_STAT4 ChIP-Seq rep

Organism:
Homo sapiens
Source name:
stimulated PBMCs_STAT4 ChIP-Seq
Platform:
GPL11154
Series:
GSE38567
Download data
Sample
Accession:
GSM945611
ID:
300945611

SRA Run Selector

13.

Blood Donor No.5_stimulated PBMCs_IRF5 ChIP-Seq rep

Organism:
Homo sapiens
Source name:
stimulated PBMCs_IRF5 ChIP-Seq
Platform:
GPL11154
Series:
GSE38567
Download data
Sample
Accession:
GSM945604
ID:
300945604

SRA Run Selector

14.

Blood Donor No.6_stimulated PBMCs_STAT4 ChIP-Seq

Organism:
Homo sapiens
Source name:
stimulated PBMCs_STAT4 ChIP-Seq
Platform:
GPL10999
Series:
GSE38567
Download data
Sample
Accession:
GSM945612
ID:
300945612

SRA Run Selector

15.

Blood Donor No.5_stimulated PBMCs_STAT4 ChIP-Seq

Organism:
Homo sapiens
Source name:
stimulated PBMCs_STAT4 ChIP-Seq
Platform:
GPL10999
Series:
GSE38567
Download data
Sample
Accession:
GSM945610
ID:
300945610

SRA Run Selector

16.

Blood Donor No.4_stimulated PBMCs_STAT4 ChIP-Seq

Organism:
Homo sapiens
Source name:
stimulated PBMCs_STAT4 ChIP-Seq
Platform:
GPL10999
Series:
GSE38567
Download data
Sample
Accession:
GSM945609
ID:
300945609

SRA Run Selector

17.

Blood Donor No.6_stimulated PBMCs_IRF5 ChIP-Seq

Organism:
Homo sapiens
Source name:
stimulated PBMCs_IRF5 ChIP-Seq
Platform:
GPL10999
Series:
GSE38567
Download data
Sample
Accession:
GSM945605
ID:
300945605

SRA Run Selector

18.

Blood Donor No.5_stimulated PBMCs_IRF5 ChIP-Seq

Organism:
Homo sapiens
Source name:
stimulated PBMCs_IRF5 ChIP-Seq
Platform:
GPL10999
Series:
GSE38567
Download data
Sample
Accession:
GSM945603
ID:
300945603

SRA Run Selector

19.

Blood Donor No.4_stimulated PBMCs_IRF5 ChIP-Seq

Organism:
Homo sapiens
Source name:
stimulated PBMCs_IRF5 ChIP-Seq
Platform:
GPL10999
Series:
GSE38567
Download data
Sample
Accession:
GSM945602
ID:
300945602

SRA Run Selector

20.

Blood Donor No.2_non-stimulated PBMCs_IRF5 ChIP-Seq rep

Organism:
Homo sapiens
Source name:
non-stimulated PBMCs_IRF5 ChIP-Seq
Platform:
GPL10999
Series:
GSE38567
Download data
Sample
Accession:
GSM945600
ID:
300945600

SRA Run Selector

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