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Items: 8

1.

Histone variant H2A.Bbd is associated with active transcription and mRNA processing in human cells [RNA-Seq]

(Submitter supplied) Variation in chromatin composition and organization often reflects differences in genome function. Histone variants, for example, replace canonical histones to contribute to regulation of numerous nuclear processes including transcription, DNA repair and chromosome segregation. Here we focus on H2A.Bbd, a rapidly evolving variant found in mammals but not in invertebrates. We report that in human cells, nucleosomes bearing H2A.Bbd form unconventional chromatin structures enriched within actively transcribed genes and characterized by shorter DNA protection and nucleosome spacing. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL11154
6 Samples
Download data: BEDGRAPH
2.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
3.

Z - KD 2

Organism:
Homo sapiens
Source name:
H2A.Z KD
Platform:
GPL11154
Series:
GSE38770 GSE38771
Download data: BEDGRAPH
Sample
Accession:
GSM949335
ID:
300949335
4.

Z - KD 1

Organism:
Homo sapiens
Source name:
H2A.Z KD
Platform:
GPL11154
Series:
GSE38770 GSE38771
Download data: BEDGRAPH
Sample
Accession:
GSM949334
ID:
300949334
5.

Bbd - KD 2

Organism:
Homo sapiens
Source name:
H2A.Bbd KD
Platform:
GPL11154
Series:
GSE38770 GSE38771
Download data: BEDGRAPH
Sample
Accession:
GSM949333
ID:
300949333
6.

Bbd - KD 1

Organism:
Homo sapiens
Source name:
H2A.Bbd KD
Platform:
GPL11154
Series:
GSE38770 GSE38771
Download data: BEDGRAPH
Sample
Accession:
GSM949332
ID:
300949332
7.

neg C - KD 2

Organism:
Homo sapiens
Source name:
control
Platform:
GPL11154
Series:
GSE38770 GSE38771
Download data: BEDGRAPH
Sample
Accession:
GSM949331
ID:
300949331
8.

neg C - KD 1

Organism:
Homo sapiens
Source name:
control
Platform:
GPL11154
Series:
GSE38770 GSE38771
Download data: BEDGRAPH
Sample
Accession:
GSM949330
ID:
300949330
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Supplemental Content

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