GSE39775[Accession] - GEO DataSets - NCBI

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Items: 10

Select item 2000397751.

Examination of four human tissue samples by MethylC-seq

(Submitter supplied) As genome-scale DNA methylation sequencing technologies have improved it has become apparent that tissue-specific methylation can occur not only at promoters, enhancers, and CpG islands but also over larger genomic regions. In most human tissues, the vast majority of the genome is highly methylated (>70%). However, genomic sequencing of bisulfite-treated DNA (MethylC-seq) has revealed large partially methylated domains (PMDs) in some human cell lines. more...

Organism:: Homo sapiens

Type:: Methylation profiling by high throughput sequencing

Platforms:: GPL11154 GPL9115
7 Samples

Download data: BED, TAR

Series

Accession:: GSE39775

ID:: 200039775

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000111542.

Illumina HiSeq 2000 (Homo sapiens)

Organism:: Homo sapiens

10398 Series
180072 Samples

Platform

Accession:: GPL11154

ID:: 100011154

Select item 1000091153.

Illumina Genome Analyzer II (Homo sapiens)

Organism:: Homo sapiens

753 Series
6113 Samples

Platform

Accession:: GPL9115

ID:: 100009115

Select item 3010838814.

placenta 3 - MethylC-seq

Organism:: Homo sapiens

Source name:: placenta

Platform:: GPL11154
Series:: GSE39775 GSE39777

Download data: BED

Sample

Accession:: GSM1083881

ID:: 301083881

SRA Run Selector

Select item 3010838805.

placenta 2 - MethylC-seq

Organism:: Homo sapiens

Source name:: placenta

Platform:: GPL11154
Series:: GSE39775 GSE39777

Download data: BED

Sample

Accession:: GSM1083880

ID:: 301083880

SRA Run Selector

Select item 3009789656.

placenta 1 (technical replicate 2) - MethylC-seq

Organism:: Homo sapiens

Source name:: placenta from full-term pregnancy

Platform:: GPL11154
Series:: GSE39775 GSE39777

Download data: TAR

Sample

Accession:: GSM978965

ID:: 300978965

SRA Run Selector

Select item 3009789647.

placenta 1 (technical replicate 1) - MethylC-seq

Organism:: Homo sapiens

Source name:: placenta from full-term pregnancy

Platform:: GPL11154
Series:: GSE39775 GSE39777

Download data: TAR

Sample

Accession:: GSM978964

ID:: 300978964

SRA Run Selector

Select item 3009789688.

cerebellum - MethylC-seq

Organism:: Homo sapiens

Source name:: cerebellum (8 year-old male)

Platform:: GPL9115
Series:: GSE39775 GSE39777

Download data: TAR

Sample

Accession:: GSM978968

ID:: 300978968

SRA Run Selector

Select item 3009789679.

NK cells - MethylC-seq

Organism:: Homo sapiens

Source name:: NK cells (adolescent male)

Platform:: GPL9115
Series:: GSE39775 GSE39777

Download data: TAR

Sample

Accession:: GSM978967

ID:: 300978967

SRA Run Selector

Select item 30097896610.

kidney - MethylC-seq

Organism:: Homo sapiens

Source name:: kidney (4 year-old male)

Platform:: GPL9115
Series:: GSE39775 GSE39777

Download data: TAR

Sample

Accession:: GSM978966

ID:: 300978966

SRA Run Selector

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