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Items: 11

1.

Genome Wide Profiling of p53 Response to Differentiation or DNA Damage of Human Embryonic Stem Cells

(Submitter supplied) Tumor suppressor p53 promotes differentiation of human embryonic stem cells (hESCs), but an in-depth understanding of mechanism is lacking. Here, we define p53 functions in hESCs by genome wide profiling of p53 chromatin interactions and intersection with gene expression during early differentiation and in response to DNA damage. During differentiation, p53 targets and regulates a unique collection of genes, many of which encode transcription factors and developmental regulators with chromatin structure poised by OCT4 and NANOG and marked by repressive H3K27me3 in pluripotent hESCs. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL10999 GPL11154
8 Samples
Download data: BED
Series
Accession:
GSE39912
ID:
200039912
2.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
3.

Illumina Genome Analyzer IIx (Homo sapiens)

Platform
Accession:
GPL10999
ID:
100010999
4.

input DNA

Organism:
Homo sapiens
Source name:
H9 hESC
Platform:
GPL10999
Series:
GSE39912
Download data: BED
Sample
Accession:
GSM981238
ID:
300981238
5.

Differentiating_p53_ChIPSeq

Organism:
Homo sapiens
Source name:
H9 hESC
Platform:
GPL10999
Series:
GSE39912
Download data: BED
Sample
Accession:
GSM981237
ID:
300981237
6.

Damaged_p53_ChIPSeq

Organism:
Homo sapiens
Source name:
H9 hESC
Platform:
GPL10999
Series:
GSE39912
Download data: BED
Sample
Accession:
GSM981236
ID:
300981236
7.

Untreated_p53_ChIPSeq

Organism:
Homo sapiens
Source name:
H9 hESC
Platform:
GPL10999
Series:
GSE39912
Download data: BED
Sample
Accession:
GSM981235
ID:
300981235
8.

Differentiating_H3K27me3_ChIPSeq

Organism:
Homo sapiens
Source name:
H9 hESC
Platform:
GPL11154
Series:
GSE39912
Download data: BED
Sample
Accession:
GSM981242
ID:
300981242
9.

Differentiating_H3K4me3_ChIPSeq

Organism:
Homo sapiens
Source name:
H9 hESC
Platform:
GPL11154
Series:
GSE39912
Download data: BED
Sample
Accession:
GSM981241
ID:
300981241
10.

Untreated_H3K27me3_ChIPSeq

Organism:
Homo sapiens
Source name:
H9 hESC
Platform:
GPL11154
Series:
GSE39912
Download data: BED
Sample
Accession:
GSM981240
ID:
300981240
11.

Untreated_H3K4me3_ChIPSeq

Organism:
Homo sapiens
Source name:
H9 hESC
Platform:
GPL11154
Series:
GSE39912
Download data: BED
Sample
Accession:
GSM981239
ID:
300981239
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Supplemental Content

db=gds|term=GSE39912[Accession]|query=1|qty=2|blobid=MCID_664573edf6306928276a6361|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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