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Items: 1 to 20 of 68

1.

Identification of a specific reprogramming-associated epigenetic signature in human induced pluripotent stem cells

(Submitter supplied) In this work, we characterized the epigenomic integrity of 17 hiPSC lines derived from six different cell types with varied reprogramming efficiencies. We demonstrate that epigenetic aberrations are a general feature of the hiPSC state and are independent of the somatic cell source. Additionally, we determine that both shared and line-specific epigenetic aberrations in hiPSCs can directly translate into changes in gene expression in both the pluripotent and differentiated states.
Organism:
Homo sapiens
Type:
Methylation profiling by high throughput sequencing
Platforms:
GPL10999 GPL11154
65 Samples
Download data: BED
Series
Accession:
GSE40372
ID:
200040372

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10400 Series
180082 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

3.

Illumina Genome Analyzer IIx (Homo sapiens)

Organism:
Homo sapiens
1096 Series
9927 Samples
Download data
Platform
Accession:
GPL10999
ID:
100010999

4.

hESC-H9

Organism:
Homo sapiens
Source name:
hESC-H9
Platform:
GPL11154
Series:
GSE40372
Download data: BED
Sample
Accession:
GSM992424
ID:
300992424

SRA Run Selector

5.

hESC-H1

Organism:
Homo sapiens
Source name:
hESC-H1
Platform:
GPL11154
Series:
GSE40372
Download data: BED
Sample
Accession:
GSM992423
ID:
300992423

SRA Run Selector

6.

HUES9

Organism:
Homo sapiens
Source name:
HUES9
Platform:
GPL11154
Series:
GSE40372
Download data: BED
Sample
Accession:
GSM992422
ID:
300992422

SRA Run Selector

7.

HUES8

Organism:
Homo sapiens
Source name:
HUES8
Platform:
GPL11154
Series:
GSE40372
Download data: BED
Sample
Accession:
GSM992421
ID:
300992421

SRA Run Selector

8.

HUES6

Organism:
Homo sapiens
Source name:
HUES6
Platform:
GPL11154
Series:
GSE40372
Download data: BED
Sample
Accession:
GSM992420
ID:
300992420

SRA Run Selector

9.

HUES3

Organism:
Homo sapiens
Source name:
HUES3
Platform:
GPL11154
Series:
GSE40372
Download data: BED
Sample
Accession:
GSM992419
ID:
300992419

SRA Run Selector

10.

HUES2

Organism:
Homo sapiens
Source name:
HUES2
Platform:
GPL11154
Series:
GSE40372
Download data: BED
Sample
Accession:
GSM992418
ID:
300992418

SRA Run Selector

11.

MSChiPS8

Organism:
Homo sapiens
Source name:
MSChiPS8
Platform:
GPL11154
Series:
GSE40372
Download data: BED
Sample
Accession:
GSM992417
ID:
300992417

SRA Run Selector

12.

MSChiPS4

Organism:
Homo sapiens
Source name:
MSChiPS4
Platform:
GPL11154
Series:
GSE40372
Download data: BED
Sample
Accession:
GSM992416
ID:
300992416

SRA Run Selector

13.

MSC_mesenchymal_stem_cells

Organism:
Homo sapiens
Source name:
MSC_mesenchymal_stem_cells
Platform:
GPL11154
Series:
GSE40372
Download data: BED
Sample
Accession:
GSM992415
ID:
300992415

SRA Run Selector

14.

FhiPS4F7

Organism:
Homo sapiens
Source name:
FhiPS4F7
Platform:
GPL11154
Series:
GSE40372
Download data: BED
Sample
Accession:
GSM992412
ID:
300992412

SRA Run Selector

15.

HFF.XF_human_fibroblasts

Organism:
Homo sapiens
Source name:
HFF.XF_human_fibroblasts
Platform:
GPL11154
Series:
GSE40372
Download data: BED
Sample
Accession:
GSM992411
ID:
300992411

SRA Run Selector

16.

FhiPS4F5

Organism:
Homo sapiens
Source name:
FhiPS4F5
Platform:
GPL11154
Series:
GSE40372
Download data: BED
Sample
Accession:
GSM992410
ID:
300992410

SRA Run Selector

17.

FhiPS4F2

Organism:
Homo sapiens
Source name:
FhiPS4F2
Platform:
GPL11154
Series:
GSE40372
Download data: BED
Sample
Accession:
GSM992409
ID:
300992409

SRA Run Selector

18.

IMR90_human_fibroblasts

Organism:
Homo sapiens
Source name:
IMR90_human_fibroblasts
Platform:
GPL11154
Series:
GSE40372
Download data: BED
Sample
Accession:
GSM992408
ID:
300992408

SRA Run Selector

19.

NSChiPS2F

Organism:
Homo sapiens
Source name:
NSChiPS2F
Platform:
GPL11154
Series:
GSE40372
Download data: BED
Sample
Accession:
GSM992407
ID:
300992407

SRA Run Selector

20.

hNSC_human_neural_stem_cells

Organism:
Homo sapiens
Source name:
hNSC_human_neural_stem_cells
Platform:
GPL11154
Series:
GSE40372
Download data: BED
Sample
Accession:
GSM992406
ID:
300992406

SRA Run Selector

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db=gds|term=GSE40372[Accession]|query=1|qty=2|blobid=MCID_6645728a86b4b6700a5270b2|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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