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Items: 8

1.

Divergent roles of ALS-linked proteins FUS/TLS and TDP-43 intersect in processing long pre-mRNAs (CLIP-Seq)

(Submitter supplied) FUS/TLS and TDP-43 are RNA/DNA-binding proteins integrally involved in amyotrophic lateral sclerosis (ALS) and frontal temporal dementia. FUS/TLS is shown to bind RNAs from >5,500 genes in mouse and human brain, primarily through a GUGGU binding motif. A characteristic sawtooth-like binding pattern is identified, supporting co-transcriptional deposition of FUS/TLS. Depletion of FUS/TLS from the adult nervous system is shown to alter levels or splicing of >970 mRNAs, most of which are distinct from the RNAs whose maturation is dependent on TDP-43. more...
Organism:
Homo sapiens; Mus musculus
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL13112 GPL11154
5 Samples
Download data: BED
Series
Accession:
GSE40651
ID:
200040651
2.

Illumina HiSeq 2000 (Mus musculus)

Platform
Accession:
GPL13112
ID:
100013112
3.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
4.

Mouse CLIPseq Fus/Tls rep3

Organism:
Mus musculus
Source name:
Whole brain
Platform:
GPL13112
Series:
GSE40651 GSE40653
Download data: BED
Sample
Accession:
GSM998874
ID:
300998874
5.

Mouse CLIPseq Fus/Tls rep2

Organism:
Mus musculus
Source name:
Whole brain
Platform:
GPL13112
Series:
GSE40651 GSE40653
Download data: BED
Sample
Accession:
GSM998873
ID:
300998873
6.

Mouse CLIPseq Fus/Tls rep1

Organism:
Mus musculus
Source name:
Whole brain
Platform:
GPL13112
Series:
GSE40651 GSE40653
Download data: BED
Sample
Accession:
GSM998872
ID:
300998872
7.

Mouse CLIPseq Tdp43

Organism:
Mus musculus
Source name:
Whole brain
Platform:
GPL13112
Series:
GSE40651 GSE40653
Download data: BED
Sample
Accession:
GSM998871
ID:
300998871
8.

Human CLIPseq FUS/TLS

Organism:
Homo sapiens
Source name:
Human brain
Platform:
GPL11154
Series:
GSE40651 GSE40653
Download data: BED
Sample
Accession:
GSM998875
ID:
300998875
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Supplemental Content

db=gds|term=GSE40651[Accession]|query=1|qty=3|blobid=MCID_66430b235f31ac49117f1253|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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