GSE41070[Accession] - GEO DataSets - NCBI

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Items: 4

Select item 2000410701.

Integrated detection of both 5-mC and 5-hmC by high-throughput tag sequencing technology highlights methylation reprogramming of bivalent genes during cellular differentiation [MeDIP_hMeDIP]

(Submitter supplied) 5-methylcytosine (5-mC) can be oxidized to 5-hydroxymethylcytosine (5-hmC). Genome-wide profiling of 5-hmC thus far indicated 5-hmC may not only be an intermediate form of DNA demethylation but could also constitute an epigenetic mark per se. We describe a cost-effective and selective method to detect both the hydroxymethylation and methylation status of cytosines in more than 1.8 million MspI sites in the human genome. more...

Organism:: Homo sapiens

Type:: Methylation profiling by high throughput sequencing

Platform:: GPL11154
2 Samples

Download data: WIG

Series

Accession:: GSE41070

ID:: 200041070

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000111542.

Illumina HiSeq 2000 (Homo sapiens)

Organism:: Homo sapiens

10400 Series
180082 Samples

Platform

Accession:: GPL11154

ID:: 100011154

Select item 3010081993.

Organism:: Homo sapiens

Source name:: embryonic stem cells

Platform:: GPL11154
Series:: GSE41070 GSE41071

Download data: WIG

Sample

Accession:: GSM1008199

ID:: 301008199

SRA Run Selector

Select item 3010081984.

Organism:: Homo sapiens

Source name:: embryonic stem cells

Platform:: GPL11154
Series:: GSE41070 GSE41071

Download data: WIG

Sample

Accession:: GSM1008198

ID:: 301008198

SRA Run Selector

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