GSE41324[Accession] - GEO DataSets - NCBI

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Items: 13

Select item 2000413241.

Signaling Pathways Deferentially Affect RNA Polymerase II Initiation, Pausing, and Elongation in Human Cells: Estrogen dependent signaling in MCF-7 cells

(Submitter supplied) We used Global Run-on and Sequencing (GRO-seq) to measure the rate of transcription elongation by RNA polymerase II (Pol II) following gene activation. We observed that Pol II elongation rates can vary as much as 4-fold at different genomic loci and in response to two distinct cellular signaling pathways (i.e., estrogen and TNFα). Elongation rates are slowest near the promoter and increase during the first ~15 kb transcribed into the gene body. more...

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL11154
11 Samples

Download data: BED, TSV, TXT

Series

Accession:: GSE41324

ID:: 200041324

PubMed Full text in PMC Similar studies Analyze with GEO2R SRA Run Selector

Select item 1000111542.

Illumina HiSeq 2000 (Homo sapiens)

Organism:: Homo sapiens

10400 Series
180082 Samples

Platform

Accession:: GPL11154

ID:: 100011154

Select item 3010146473.

GRO-seq_E2_40m_MCF7_3

Organism:: Homo sapiens

Source name:: MCF7

Platform:: GPL11154
Series:: GSE41324

Download data: BED

Sample

Accession:: GSM1014647

ID:: 301014647

SRA Run Selector

Select item 3010146464.

GRO-seq_E2_40m_MCF7_2

Organism:: Homo sapiens

Source name:: MCF7

Platform:: GPL11154
Series:: GSE41324

Download data: BED

Sample

Accession:: GSM1014646

ID:: 301014646

SRA Run Selector

Select item 3010146455.

GRO-seq_E2_40m_MCF7_1

Organism:: Homo sapiens

Source name:: MCF7

Platform:: GPL11154
Series:: GSE41324

Download data: BED

Sample

Accession:: GSM1014645

ID:: 301014645

SRA Run Selector

Select item 3010146446.

GRO-seq_E2_25m_MCF7_2

Organism:: Homo sapiens

Source name:: MCF7

Platform:: GPL11154
Series:: GSE41324

Download data: BED

Sample

Accession:: GSM1014644

ID:: 301014644

SRA Run Selector

Select item 3010146437.

GRO-seq_E2_25m_MCF7_1

Organism:: Homo sapiens

Source name:: MCF7

Platform:: GPL11154
Series:: GSE41324

Download data: BED

Sample

Accession:: GSM1014643

ID:: 301014643

SRA Run Selector

Select item 3010146428.

GRO-seq_E2_10m_MCF7_3

Organism:: Homo sapiens

Source name:: MCF7

Platform:: GPL11154
Series:: GSE41324

Download data: BED

Sample

Accession:: GSM1014642

ID:: 301014642

SRA Run Selector

Select item 3010146419.

GRO-seq_E2_10m_MCF7_2

Organism:: Homo sapiens

Source name:: MCF7

Platform:: GPL11154
Series:: GSE41324

Download data: BED

Sample

Accession:: GSM1014641

ID:: 301014641

SRA Run Selector

Select item 30101464010.

GRO-seq_E2_10m_MCF7_1

Organism:: Homo sapiens

Source name:: MCF7

Platform:: GPL11154
Series:: GSE41324

Download data: BED

Sample

Accession:: GSM1014640

ID:: 301014640

SRA Run Selector

Select item 30101463911.

GRO-seq_Vehicle_MCF7_3

Organism:: Homo sapiens

Source name:: MCF7

Platform:: GPL11154
Series:: GSE41324

Download data: BED

Sample

Accession:: GSM1014639

ID:: 301014639

SRA Run Selector

Select item 30101463812.

GRO-seq_Vehicle_MCF7_2

Organism:: Homo sapiens

Source name:: MCF7

Platform:: GPL11154
Series:: GSE41324

Download data: BED

Sample

Accession:: GSM1014638

ID:: 301014638

SRA Run Selector

Select item 30101463713.

GRO-seq_Vehicle_MCF7_1

Organism:: Homo sapiens

Source name:: MCF7

Platform:: GPL11154
Series:: GSE41324

Download data: BED

Sample

Accession:: GSM1014637

ID:: 301014637

SRA Run Selector

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