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Items: 11

1.

Expression data for HT29 cells treated with 5-aza-deoxy-cytidine [RNA-Seq]

(Submitter supplied) The RNA samples from HT-29 (ATCC) colon cancer cell line were reverse transcribed to build cDNA libraries and categorized into 3 groups with different concentrations of 5-aza-deoxy-cytidine (5-Aza); in each group three replicative 150 mm cultures were treated with: 1) dimethyl sulfoxide (vehicle alone, 0 μM 5-Aza); 2) 5μM 5-Aza and 3) 10 μM 5-Aza; for five days. This experiment was also performed parallel on a commercial Affymetrix microarray [GSE41364] and the aim of the study was to compare the two platforms on gene expression measurements and differentially expressed gene (DEG) detection. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL11154
9 Samples
Download data: TXT
Series
Accession:
GSE41586
ID:
200041586

PubMed Full text in PMC Similar studies Analyze with GEO2RSRA Run Selector

2.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10400 Series
180082 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

3.

HT29 at 10 μM of 5-Aza, biological rep3

Organism:
Homo sapiens
Source name:
HT29 treated with 10 μM of 5-Aza
Platform:
GPL11154
Series:
GSE41586 GSE41588
Download data: TXT
Sample
Accession:
GSM1019743
ID:
301019743

SRA Run Selector

4.

HT29 at 10 μM of 5-Aza, biological rep2

Organism:
Homo sapiens
Source name:
HT29 treated with 10 μM of 5-Aza
Platform:
GPL11154
Series:
GSE41586 GSE41588
Download data: TXT
Sample
Accession:
GSM1019742
ID:
301019742

SRA Run Selector

5.

HT29 at 10 μM of 5-Aza, biological rep1

Organism:
Homo sapiens
Source name:
HT29 treated with 10 μM of 5-Aza
Platform:
GPL11154
Series:
GSE41586 GSE41588
Download data: TXT
Sample
Accession:
GSM1019741
ID:
301019741

SRA Run Selector

6.

HT29 at 5 μM of 5-Aza, biological rep3

Organism:
Homo sapiens
Source name:
HT29 treated with 5 μM of 5-Aza
Platform:
GPL11154
Series:
GSE41586 GSE41588
Download data: TXT
Sample
Accession:
GSM1019740
ID:
301019740

SRA Run Selector

7.

HT29 at 5 μM of 5-Aza, biological rep2

Organism:
Homo sapiens
Source name:
HT29 treated with 5 μM of 5-Aza
Platform:
GPL11154
Series:
GSE41586 GSE41588
Download data: TXT
Sample
Accession:
GSM1019739
ID:
301019739

SRA Run Selector

8.

HT29 at 5 μM of 5-Aza, biological rep1

Organism:
Homo sapiens
Source name:
HT29 treated with 5 μM of 5-Aza
Platform:
GPL11154
Series:
GSE41586 GSE41588
Download data: TXT
Sample
Accession:
GSM1019738
ID:
301019738

SRA Run Selector

9.

HT29 at 0 μM of 5-Aza, biological rep3

Organism:
Homo sapiens
Source name:
HT29 treated with 0 μM of 5-Aza
Platform:
GPL11154
Series:
GSE41586 GSE41588
Download data: TXT
Sample
Accession:
GSM1019737
ID:
301019737

SRA Run Selector

10.

HT29 at 0 μM of 5-Aza, biological rep2

Organism:
Homo sapiens
Source name:
HT29 treated with 0 μM of 5-Aza
Platform:
GPL11154
Series:
GSE41586 GSE41588
Download data: TXT
Sample
Accession:
GSM1019736
ID:
301019736

SRA Run Selector

11.

HT29 at 0 μM of 5-Aza, biological rep1

Organism:
Homo sapiens
Source name:
HT29 treated with 0 μM of 5-Aza
Platform:
GPL11154
Series:
GSE41586 GSE41588
Download data: TXT
Sample
Accession:
GSM1019735
ID:
301019735

SRA Run Selector

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