GSE41716[Accession] - GEO DataSets - NCBI

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Select item 2000417161.

Somatic copy-number mosaicism in human skin revealed by induced pluripotent stem cells (sequencing)

(Submitter supplied) Reprogramming human somatic cells into induced pluripotent stem cells (iPSC) has been suspected of causing de novo copy number variations (CNVs). To explore this issue, we performed a whole-genome and transcriptome analysis of 20 human iPSC lines derived from primary skin fibroblasts of 7 individuals using next-generation sequencing. We find that, on average, an iPSC line manifests two CNVs not apparent in the fibroblasts from which the iPSC was derived. more...

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL11154
29 Samples

Download data: RPKM

Series

Accession:: GSE41716

ID:: 200041716

PubMed Full text in PMC Similar studies Analyze with GEO2R SRA Run Selector

Select item 1000111542.

Illumina HiSeq 2000 (Homo sapiens)

Organism:: Homo sapiens

10400 Series
180082 Samples

Platform

Accession:: GPL11154

ID:: 100011154

Select item 3010230873.

Organism:: Homo sapiens

Source name:: iPS

Platform:: GPL11154
Series:: GSE41716

Download data: RPKM

Sample

Accession:: GSM1023087

ID:: 301023087

SRA Run Selector

Select item 3010230864.

RNA S1123-03, i9

Organism:: Homo sapiens

Source name:: iPS

Platform:: GPL11154
Series:: GSE41716

Download data: RPKM

Sample

Accession:: GSM1023086

ID:: 301023086

SRA Run Selector

Select item 3010230855.

RNA S1123-03, i8

Organism:: Homo sapiens

Source name:: iPS

Platform:: GPL11154
Series:: GSE41716

Download data: RPKM

Sample

Accession:: GSM1023085

ID:: 301023085

SRA Run Selector

Select item 3010230846.

RNA S1123-03, i1

Organism:: Homo sapiens

Source name:: iPS

Platform:: GPL11154
Series:: GSE41716

Download data: RPKM

Sample

Accession:: GSM1023084

ID:: 301023084

SRA Run Selector

Select item 3010230837.

RNA S1123-03, F

Organism:: Homo sapiens

Source name:: fibroblast

Platform:: GPL11154
Series:: GSE41716

Download data: RPKM

Sample

Accession:: GSM1023083

ID:: 301023083

SRA Run Selector

Select item 3010230828.

RNA S1123-02, i2

Organism:: Homo sapiens

Source name:: iPS

Platform:: GPL11154
Series:: GSE41716

Download data: RPKM

Sample

Accession:: GSM1023082

ID:: 301023082

SRA Run Selector

Select item 3010230819.

RNA S1123-02, i17

Organism:: Homo sapiens

Source name:: iPS

Platform:: GPL11154
Series:: GSE41716

Download data: RPKM

Sample

Accession:: GSM1023081

ID:: 301023081

SRA Run Selector

Select item 30102308010.

RNA S1123-02, i11

Organism:: Homo sapiens

Source name:: iPS

Platform:: GPL11154
Series:: GSE41716

Download data: RPKM

Sample

Accession:: GSM1023080

ID:: 301023080

SRA Run Selector

Select item 30102307911.

RNA S1123-02, F

Organism:: Homo sapiens

Source name:: fibroblast

Platform:: GPL11154
Series:: GSE41716

Download data: RPKM

Sample

Accession:: GSM1023079

ID:: 301023079

SRA Run Selector

Select item 30102307812.

RNA S1123-01, i4

Organism:: Homo sapiens

Source name:: iPS

Platform:: GPL11154
Series:: GSE41716

Download data: RPKM

Sample

Accession:: GSM1023078

ID:: 301023078

SRA Run Selector

Select item 30102307713.

RNA S1123-01, i3

Organism:: Homo sapiens

Source name:: iPS

Platform:: GPL11154
Series:: GSE41716

Download data: RPKM

Sample

Accession:: GSM1023077

ID:: 301023077

SRA Run Selector

Select item 30102307614.

RNA S1123-01, i1

Organism:: Homo sapiens

Source name:: iPS

Platform:: GPL11154
Series:: GSE41716

Download data: RPKM

Sample

Accession:: GSM1023076

ID:: 301023076

SRA Run Selector

Select item 30102307515.

RNA S1123-01, F

Organism:: Homo sapiens

Source name:: fibroblast

Platform:: GPL11154
Series:: GSE41716

Download data: RPKM

Sample

Accession:: GSM1023075

ID:: 301023075

SRA Run Selector

Select item 30102307416.

Organism:: Homo sapiens

Source name:: iPS

Platform:: GPL11154
Series:: GSE41716

Download data: RPKM

Sample

Accession:: GSM1023074

ID:: 301023074

SRA Run Selector

Select item 30102307317.

Organism:: Homo sapiens

Source name:: iPS

Platform:: GPL11154
Series:: GSE41716

Download data: RPKM

Sample

Accession:: GSM1023073

ID:: 301023073

SRA Run Selector

Select item 30102307218.

Organism:: Homo sapiens

Source name:: iPS

Platform:: GPL11154
Series:: GSE41716

Download data: RPKM

Sample

Accession:: GSM1023072

ID:: 301023072

SRA Run Selector

Select item 30102307119.

Organism:: Homo sapiens

Source name:: fibroblast

Platform:: GPL11154
Series:: GSE41716

Download data: RPKM

Sample

Accession:: GSM1023071

ID:: 301023071

SRA Run Selector

Select item 30102307020.

Organism:: Homo sapiens

Source name:: iPS

Platform:: GPL11154
Series:: GSE41716

Download data: RPKM

Sample

Accession:: GSM1023070

ID:: 301023070

SRA Run Selector

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