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Items: 1 to 20 of 27

1.

Limitations and possibilities of low cell number ChIP-seq

(Submitter supplied) ChIP-seq experiments using low numbers of input cells, scaled down to the point where data quality is unnacceptably compromised, reveals limits of the technique.
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL10999 GPL11154
24 Samples
Download data: BED, BEDGRAPH
Series
Accession:
GSE42147
ID:
200042147

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10400 Series
180082 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

3.

Illumina Genome Analyzer IIx (Homo sapiens)

Organism:
Homo sapiens
1096 Series
9927 Samples
Download data
Platform
Accession:
GPL10999
ID:
100010999

4.

H3K4me3_2x10e4_R3

Organism:
Homo sapiens
Source name:
Primary (live-frozen) CD4+ cells
Platform:
GPL11154
Series:
GSE42147
Download data: BEDGRAPH
Sample
Accession:
GSM1033575
ID:
301033575

SRA Run Selector

5.

H3K4me3_2x10e4_R2

Organism:
Homo sapiens
Source name:
Primary (live-frozen) CD4+ cells
Platform:
GPL11154
Series:
GSE42147
Download data: BEDGRAPH
Sample
Accession:
GSM1033574
ID:
301033574

SRA Run Selector

6.

H3K4me3_2x10e4_R1

Organism:
Homo sapiens
Source name:
Primary (live-frozen) CD4+ cells
Platform:
GPL11154
Series:
GSE42147
Download data: BEDGRAPH
Sample
Accession:
GSM1033573
ID:
301033573

SRA Run Selector

7.

H3K4me3_1x10e5_R3

Organism:
Homo sapiens
Source name:
Primary (live-frozen) CD4+ cells
Platform:
GPL11154
Series:
GSE42147
Download data: BEDGRAPH
Sample
Accession:
GSM1033572
ID:
301033572

SRA Run Selector

8.

H3K4me3_1x10e5_R2

Organism:
Homo sapiens
Source name:
Primary (live-frozen) CD4+ cells
Platform:
GPL11154
Series:
GSE42147
Download data: BEDGRAPH
Sample
Accession:
GSM1033571
ID:
301033571

SRA Run Selector

9.

H3K4me3_1x10e5_R1

Organism:
Homo sapiens
Source name:
Primary (live-frozen) CD4+ cells
Platform:
GPL11154
Series:
GSE42147
Download data: BEDGRAPH
Sample
Accession:
GSM1033570
ID:
301033570

SRA Run Selector

10.

H3K27me3_2x10e4_R3

Organism:
Homo sapiens
Source name:
Primary (live-frozen) CD4+ cells
Platform:
GPL11154
Series:
GSE42147
Download data: BEDGRAPH
Sample
Accession:
GSM1033569
ID:
301033569

SRA Run Selector

11.

H3K27me3_2x10e4_R2

Organism:
Homo sapiens
Source name:
Primary (live-frozen) CD4+ cells
Platform:
GPL11154
Series:
GSE42147
Download data: BEDGRAPH
Sample
Accession:
GSM1033568
ID:
301033568

SRA Run Selector

12.

H3K27me3_2x10e4_R1

Organism:
Homo sapiens
Source name:
Primary (live-frozen) CD4+ cells
Platform:
GPL11154
Series:
GSE42147
Download data: BEDGRAPH
Sample
Accession:
GSM1033567
ID:
301033567

SRA Run Selector

13.

H3K27me3_1x10e5_R3

Organism:
Homo sapiens
Source name:
Primary (live-frozen) CD4+ cells
Platform:
GPL11154
Series:
GSE42147
Download data: BEDGRAPH
Sample
Accession:
GSM1033566
ID:
301033566

SRA Run Selector

14.

H3K27me3_1x10e5_R2

Organism:
Homo sapiens
Source name:
Primary (live-frozen) CD4+ cells
Platform:
GPL11154
Series:
GSE42147
Download data: BEDGRAPH
Sample
Accession:
GSM1033565
ID:
301033565

SRA Run Selector

15.

H3K27me3_1x10e5_R1

Organism:
Homo sapiens
Source name:
Primary (live-frozen) CD4+ cells
Platform:
GPL11154
Series:
GSE42147
Download data: BEDGRAPH
Sample
Accession:
GSM1033564
ID:
301033564

SRA Run Selector

16.

New_input_2x10e4

Organism:
Homo sapiens
Source name:
Cultured CD4+ cells
Platform:
GPL11154
Series:
GSE42147
Download data
Sample
Accession:
GSM1033563
ID:
301033563

SRA Run Selector

17.

New_input_1x10e5

Organism:
Homo sapiens
Source name:
Cultured CD4+ cells
Platform:
GPL11154
Series:
GSE42147
Download data
Sample
Accession:
GSM1033562
ID:
301033562

SRA Run Selector

18.

New_input_0.5x10e6

Organism:
Homo sapiens
Source name:
Cultured CD4+ cells
Platform:
GPL11154
Series:
GSE42147
Download data
Sample
Accession:
GSM1033561
ID:
301033561

SRA Run Selector

19.

New_input_2.5x10e6

Organism:
Homo sapiens
Source name:
Cultured CD4+ cells
Platform:
GPL11154
Series:
GSE42147
Download data
Sample
Accession:
GSM1033560
ID:
301033560

SRA Run Selector

20.

New_input_2x10e7

Organism:
Homo sapiens
Source name:
Cultured CD4+ cells
Platform:
GPL11154
Series:
GSE42147
Download data
Sample
Accession:
GSM1033559
ID:
301033559

SRA Run Selector

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