GSE42951[Accession] - GEO DataSets - NCBI

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Items: 18

Select item 2000429511.

Genome-wide maps of WT and over-expressing CenH3/CENP-A in Human HeLa S3 cells

(Submitter supplied) Centromeres are essential to ensure proper chromosome segregation in eukaryotes. Their definition relies on the presence of a centromere-specific H3 histone variant CenH3, known as CENP-A in mammals. Its overexpression in aggressive cancers raises questions concerning its effect on chromatin dynamics and contribution to tumorigenesis. We find that CenH3 overexpression in human cells leads to ectopic enrichment at sites of active histone turnover. more...

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing

Platform:: GPL11154
16 Samples

Download data: BED, TXT, WIG

Series

Accession:: GSE42951

ID:: 200042951

PubMed Similar studies Analyze with GEO2R SRA Run Selector

Select item 1000111542.

Illumina HiSeq 2000 (Homo sapiens)

Organism:: Homo sapiens

10400 Series
180082 Samples

Platform

Accession:: GPL11154

ID:: 100011154

Select item 3011556353.

eCenH3 RNA-seq Replicate 3

Organism:: Homo sapiens

Source name:: eCenH3 RNA-seq

Platform:: GPL11154
Series:: GSE42951

Sample

Accession:: GSM1155635

ID:: 301155635

SRA Run Selector

Select item 3011556344.

eCenH3 RNA-seq Replicate 2

Organism:: Homo sapiens

Source name:: eCenH3 RNA-seq

Platform:: GPL11154
Series:: GSE42951

Sample

Accession:: GSM1155634

ID:: 301155634

SRA Run Selector

Select item 3011556335.

eCenH3 RNA-seq Replicate 1

Organism:: Homo sapiens

Source name:: eCenH3 RNA-seq

Platform:: GPL11154
Series:: GSE42951

Sample

Accession:: GSM1155633

ID:: 301155633

SRA Run Selector

Select item 3011556326.

Hela S3 WT RNA-seq Replicate 3

Organism:: Homo sapiens

Source name:: Hela S3 WT RNA-seq

Platform:: GPL11154
Series:: GSE42951

Sample

Accession:: GSM1155632

ID:: 301155632

SRA Run Selector

Select item 3011556317.

Hela S3 WT RNA-seq Replicate 2

Organism:: Homo sapiens

Source name:: Hela S3 WT RNA-seq

Platform:: GPL11154
Series:: GSE42951

Sample

Accession:: GSM1155631

ID:: 301155631

SRA Run Selector

Select item 3011556308.

Hela S3 WT RNA-seq Replicate 1

Organism:: Homo sapiens

Source name:: Hela S3 WT RNA-seq

Platform:: GPL11154
Series:: GSE42951

Sample

Accession:: GSM1155630

ID:: 301155630

SRA Run Selector

Select item 3011556299.

Heterotypic CenH3 (CenH3/H3) ChIP-seq

Organism:: Homo sapiens

Source name:: Heterotypic CenH3 (CenH3/H3) ChIP-seq

Platform:: GPL11154
Series:: GSE42951

Download data: BED, WIG

Sample

Accession:: GSM1155629

ID:: 301155629

SRA Run Selector

Select item 30115562810.

Homotypic CenH3 (CenH3/CenH3) ChIP-seq

Organism:: Homo sapiens

Source name:: Homotypic CenH3 (CenH3/CenH3) ChIP-seq

Platform:: GPL11154
Series:: GSE42951

Download data: BED, WIG

Sample

Accession:: GSM1155628

ID:: 301155628

SRA Run Selector

Select item 30105382411.

eCenH3 ChIP-seq (replicate 2)

Organism:: Homo sapiens

Source name:: eCenH3 ChIP

Platform:: GPL11154
Series:: GSE42951

Download data: BED, WIG

Sample

Accession:: GSM1053824

ID:: 301053824

SRA Run Selector

Select item 30105382312.

eCenH3 ChIP-seq (replicate 1)

Organism:: Homo sapiens

Source name:: eCenH3 ChIP

Platform:: GPL11154
Series:: GSE42951

Download data: BED, WIG

Sample

Accession:: GSM1053823

ID:: 301053823

SRA Run Selector

Select item 30105382213.

eCenH3 MNase input (replicate 2)

Organism:: Homo sapiens

Source name:: eCenH3 MNase input

Platform:: GPL11154
Series:: GSE42951

Download data: WIG

Sample

Accession:: GSM1053822

ID:: 301053822

SRA Run Selector

Select item 30105382114.

eCenH3 MNase input (replicate 1)

Organism:: Homo sapiens

Source name:: eCenH3 MNase input

Platform:: GPL11154
Series:: GSE42951

Download data: WIG

Sample

Accession:: GSM1053821

ID:: 301053821

SRA Run Selector

Select item 30105382015.

WT CenH3 ChIP-seq (replicate 2)

Organism:: Homo sapiens

Source name:: WT CenH3 ChIP

Platform:: GPL11154
Series:: GSE42951

Download data: BED, WIG

Sample

Accession:: GSM1053820

ID:: 301053820

SRA Run Selector

Select item 30105381916.

WT CenH3 ChIP-seq (replicate 1)

Organism:: Homo sapiens

Source name:: WT CenH3 ChIP

Platform:: GPL11154
Series:: GSE42951

Download data: BED, WIG

Sample

Accession:: GSM1053819

ID:: 301053819

SRA Run Selector

Select item 30105381817.

WT MNase input (replicate 2)

Organism:: Homo sapiens

Source name:: WT MNase input

Platform:: GPL11154
Series:: GSE42951

Download data: WIG

Sample

Accession:: GSM1053818

ID:: 301053818

SRA Run Selector

Select item 30105381718.

WT MNase input (replicate 1)

Organism:: Homo sapiens

Source name:: WT MNase input

Platform:: GPL11154
Series:: GSE42951

Download data: WIG

Sample

Accession:: GSM1053817

ID:: 301053817

SRA Run Selector

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