GSE43093[Accession] - GEO DataSets - NCBI

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Items: 5

Select item 2000430931.

Direct ChIP-bisulfite sequencing reveals a role of H3K27me3 mediating aberrant hypermethylation of promoter CpG islands in cancer cells (RNA-seq)

(Submitter supplied) Aberrant DNA hypermethylation of CpG island (CGI) promoters are associated with transcriptional repression of many tumor suppressor genes and lead to tumor progression in many cancers. Most recently, one research group observed that aberrantly hypermethylated genes in multiple cancers are already repressed, but their promoters are maintained in a hypomethylated state in pre-cancerous tissues.Their studies didn't provide a clue to explain by what mechanisms those genes were repressed in pre-cancerous tissues. more...

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL11154
3 Samples

Download data: BED, TXT

Series

Accession:: GSE43093

ID:: 200043093

PubMed Similar studies Analyze with GEO2R SRA Run Selector

Select item 1000111542.

Illumina HiSeq 2000 (Homo sapiens)

Organism:: Homo sapiens

10400 Series
180082 Samples

Platform

Accession:: GPL11154

ID:: 100011154

Select item 3010565293.

BGC-823-RNA-seq

Organism:: Homo sapiens

Source name:: gastric adenocarcinoma cells

Platform:: GPL11154
Series:: GSE43093 GSE43096

Download data: BED, TXT

Sample

Accession:: GSM1056529

ID:: 301056529

SRA Run Selector

Select item 3010565284.

Organism:: Homo sapiens

Source name:: gastric adenocarcinoma cells

Platform:: GPL11154
Series:: GSE43093 GSE43096

Download data: BED, TXT

Sample

Accession:: GSM1056528

ID:: 301056528

SRA Run Selector

Select item 3010565275.

Organism:: Homo sapiens

Source name:: lymphoblastoid cells

Platform:: GPL11154
Series:: GSE43093 GSE43096

Download data: BED, TXT

Sample

Accession:: GSM1056527

ID:: 301056527

SRA Run Selector

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GSE43093[Accession] (5)
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