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Items: 18

1.

Direct ChIP-bisulfite sequencing reveals a role of H3K27me3 mediating aberrant hypermethylation of promoter CpG islands in cancer cells

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
Platform:
GPL11154
16 Samples
Download data: BED, TXT, WIG
Series
Accession:
GSE43096
ID:
200043096
2.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
3.

HeLa-H3K27me3-ChIP-BS-repeat

Organism:
Homo sapiens
Source name:
cervix adenocarcinoma clells
Platform:
GPL11154
Series:
GSE43094 GSE43096
Download data: BED, WIG
Sample
Accession:
GSM1056542
ID:
301056542
4.

HeLa-H3K27me3-ChIP-BS

Organism:
Homo sapiens
Source name:
cervix adenocarcinoma clells
Platform:
GPL11154
Series:
GSE43094 GSE43096
Download data: BED, TXT, WIG
Sample
Accession:
GSM1056541
ID:
301056541
5.

HeLa-H3K27me3-ChIP-repeat

Organism:
Homo sapiens
Source name:
cervix adenocarcinoma clells
Platform:
GPL11154
Series:
GSE43094 GSE43096
Download data: BED, WIG
Sample
Accession:
GSM1056540
ID:
301056540
6.

HeLa-H3K27me3-ChIP

Organism:
Homo sapiens
Source name:
cervix adenocarcinoma clells
Platform:
GPL11154
Series:
GSE43094 GSE43096
Download data: BED, WIG
Sample
Accession:
GSM1056539
ID:
301056539
7.

AGS-H3K27me3-ChIP-BS-repeat2

Organism:
Homo sapiens
Source name:
gastric adenocarcinoma cells
Platform:
GPL11154
Series:
GSE43094 GSE43096
Download data: BED, WIG
Sample
Accession:
GSM1056538
ID:
301056538
8.

AGS-H3K27me3-ChIP-BS-repeat1

Organism:
Homo sapiens
Source name:
gastric adenocarcinoma cells
Platform:
GPL11154
Series:
GSE43094 GSE43096
Download data: BED, WIG
Sample
Accession:
GSM1056537
ID:
301056537
9.

AGS-H3K27me3-ChIP-BS

Organism:
Homo sapiens
Source name:
gastric adenocarcinoma cells
Platform:
GPL11154
Series:
GSE43094 GSE43096
Download data: BED, TXT, WIG
Sample
Accession:
GSM1056536
ID:
301056536
10.

AGS-H3K4me3-ChIP-BS-repeat

Organism:
Homo sapiens
Source name:
gastric adenocarcinoma cells
Platform:
GPL11154
Series:
GSE43094 GSE43096
Download data: BED, WIG
Sample
Accession:
GSM1056535
ID:
301056535
11.

AGS-H3K4me3-ChIP-BS

Organism:
Homo sapiens
Source name:
gastric adenocarcinoma cells
Platform:
GPL11154
Series:
GSE43094 GSE43096
Download data: BED, TXT, WIG
Sample
Accession:
GSM1056534
ID:
301056534
12.

BGC-823-H3K27me3-ChIP-BS

Organism:
Homo sapiens
Source name:
gastric adenocarcinoma cells
Platform:
GPL11154
Series:
GSE43094 GSE43096
Download data: BED, TXT, WIG
Sample
Accession:
GSM1056533
ID:
301056533
13.

BGC-823-H3K4me3-ChIP-BS

Organism:
Homo sapiens
Source name:
gastric adenocarcinoma cells
Platform:
GPL11154
Series:
GSE43094 GSE43096
Download data: BED, TXT, WIG
Sample
Accession:
GSM1056532
ID:
301056532
14.

YH-H3K27me3-ChIP-BS

Organism:
Homo sapiens
Source name:
lymphoblastoid cells
Platform:
GPL11154
Series:
GSE43094 GSE43096
Download data: BED, TXT, WIG
Sample
Accession:
GSM1056531
ID:
301056531
15.

YH-H3K4me3-ChIP_BS

Organism:
Homo sapiens
Source name:
lymphoblastoid cells
Platform:
GPL11154
Series:
GSE43094 GSE43096
Download data: BED, TXT, WIG
Sample
Accession:
GSM1056530
ID:
301056530
16.

BGC-823-RNA-seq

Organism:
Homo sapiens
Source name:
gastric adenocarcinoma cells
Platform:
GPL11154
Series:
GSE43093 GSE43096
Download data: BED, TXT
Sample
Accession:
GSM1056529
ID:
301056529
17.

AGS-RNA-seq

Organism:
Homo sapiens
Source name:
gastric adenocarcinoma cells
Platform:
GPL11154
Series:
GSE43093 GSE43096
Download data: BED, TXT
Sample
Accession:
GSM1056528
ID:
301056528
18.

YH-RNA-seq

Organism:
Homo sapiens
Source name:
lymphoblastoid cells
Platform:
GPL11154
Series:
GSE43093 GSE43096
Download data: BED, TXT
Sample
Accession:
GSM1056527
ID:
301056527
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Supplemental Content

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