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Items: 14

1.

Integrated analysis of DNA methylation and RNA transcriptome during the differentiation of human pluripotent stem cells into retinal pigment epithelial cells

(Submitter supplied) Using the paradigm of in vitro differentiation of hESCs/iPSCs into retinal pigment epithelial (RPE) cells, we have recently profiled mRNA and miRNA transcriptomes to define a set of RPE mRNA and miRNA signature genes implicated in directed RPE differentiation. In this study, in order to understand the role of DNA methylation in RPE differentiation, we profiled genome-scale DNA methylation patterns using the method of reduced representation bisulfite sequencing (RRBS). more...
Organism:
Homo sapiens
Type:
Methylation profiling by high throughput sequencing
Platform:
GPL11154
12 Samples
Download data: WIG
Series
Accession:
GSE43473
ID:
200043473

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10400 Series
180082 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

3.

UCLA4 RPE

Organism:
Homo sapiens
Source name:
retinal pigmented epithelium
Platform:
GPL11154
Series:
GSE43473
Download data: WIG
Sample
Accession:
GSM1063316
ID:
301063316

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4.

UCLA4 ESC

Organism:
Homo sapiens
Source name:
embryonic stem cells
Platform:
GPL11154
Series:
GSE43473
Download data: WIG
Sample
Accession:
GSM1063315
ID:
301063315

SRA Run Selector

5.

hiPS2 RPE

Organism:
Homo sapiens
Source name:
retinal pigmented epithelium
Platform:
GPL11154
Series:
GSE43473
Download data: WIG
Sample
Accession:
GSM1063314
ID:
301063314

SRA Run Selector

6.

hiPS2

Organism:
Homo sapiens
Source name:
induced pluripotent stem cells
Platform:
GPL11154
Series:
GSE43473
Download data: WIG
Sample
Accession:
GSM1063313
ID:
301063313

SRA Run Selector

7.

HDF RPE

Organism:
Homo sapiens
Source name:
retinal pigmented epithelium
Platform:
GPL11154
Series:
GSE43473
Download data: WIG
Sample
Accession:
GSM1063312
ID:
301063312

SRA Run Selector

8.

HDF iPS

Organism:
Homo sapiens
Source name:
induced pluripotent stem cells
Platform:
GPL11154
Series:
GSE43473
Download data: WIG
Sample
Accession:
GSM1063311
ID:
301063311

SRA Run Selector

9.

H9 RPE

Organism:
Homo sapiens
Source name:
retinal pigmented epithelium
Platform:
GPL11154
Series:
GSE43473
Download data: WIG
Sample
Accession:
GSM1063310
ID:
301063310

SRA Run Selector

10.

H9 PD

Organism:
Homo sapiens
Source name:
partially differentiated ESCs
Platform:
GPL11154
Series:
GSE43473
Download data: WIG
Sample
Accession:
GSM1063309
ID:
301063309

SRA Run Selector

11.

H9 PC

Organism:
Homo sapiens
Source name:
pigmented cluster
Platform:
GPL11154
Series:
GSE43473
Download data: WIG
Sample
Accession:
GSM1063308
ID:
301063308

SRA Run Selector

12.

H9 ESC

Organism:
Homo sapiens
Source name:
embryonic stem cells
Platform:
GPL11154
Series:
GSE43473
Download data: WIG
Sample
Accession:
GSM1063307
ID:
301063307

SRA Run Selector

13.

fetal RPE 2

Organism:
Homo sapiens
Source name:
retinal pigmented epithelium
Platform:
GPL11154
Series:
GSE43473
Download data: WIG
Sample
Accession:
GSM1063306
ID:
301063306

SRA Run Selector

14.

fetal RPE 1

Organism:
Homo sapiens
Source name:
retinal pigmented epithelium
Platform:
GPL11154
Series:
GSE43473
Download data: WIG
Sample
Accession:
GSM1063305
ID:
301063305

SRA Run Selector

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