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Items: 14

1.

Classification of cancer cell lines using a promoter-targeted liquid hybridization capture-based bisulfite sequencing approach

(Submitter supplied) DNA methylation plays a significant role in assuring cell identity, thus potentiating its application in molecular classification of cancers in respect of tissue origins or clinically and aetiologically distinct subtypes. In this study, we adapted our liquid hybridization capture-based bisulfite sequencing approach on the targeted sequencing of promoter methylomes. We detected ten cell lines originated from different tissue origins and demonstrated a similar potentiality of promoter methylomes as classifiers for cancer cell lines from different tissue origins in comparison with gene expression profiles. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
Platform:
GPL11154
12 Samples
Download data: BED, TXT
Series
Accession:
GSE44866
ID:
200044866
2.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
3.

OS-RC-2-RNA-seq

Organism:
Homo sapiens
Source name:
OS-RC-2-RNA-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED, TXT
Sample
Accession:
GSM1093061
ID:
301093061
4.

786-O-RNA-seq

Organism:
Homo sapiens
Source name:
786-O-RNA-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED, TXT
Sample
Accession:
GSM1093060
ID:
301093060
5.

OS-RC-2-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
OS-RC-2-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093059
ID:
301093059
6.

T24-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
T24-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093058
ID:
301093058
7.

NCl-H1395-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
NCl-H1395-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093057
ID:
301093057
8.

HCC827-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
HCC827-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093056
ID:
301093056
9.

786-O-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
786-O-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093055
ID:
301093055
10.

AGS-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
AGS-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093054
ID:
301093054
11.

BGC-823-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
BGC-823-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093053
ID:
301093053
12.

5637-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
5637-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093052
ID:
301093052
13.

YH-rep-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
YH-rep-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093051
ID:
301093051
14.

YH-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
YH-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093050
ID:
301093050
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Supplemental Content

db=gds|term=GSE44866[Accession]|query=1|qty=2|blobid=MCID_6724099abc40331ebe7a94da|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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