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Items: 14

1.

Classification of cancer cell lines using a promoter-targeted liquid hybridization capture-based bisulfite sequencing approach

(Submitter supplied) DNA methylation plays a significant role in assuring cell identity, thus potentiating its application in molecular classification of cancers in respect of tissue origins or clinically and aetiologically distinct subtypes. In this study, we adapted our liquid hybridization capture-based bisulfite sequencing approach on the targeted sequencing of promoter methylomes. We detected ten cell lines originated from different tissue origins and demonstrated a similar potentiality of promoter methylomes as classifiers for cancer cell lines from different tissue origins in comparison with gene expression profiles. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
Platform:
GPL11154
12 Samples
Download data: BED, TXT
Series
Accession:
GSE44866
ID:
200044866

PubMed Similar studies Analyze with GEO2RSRA Run Selector

2.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10400 Series
180082 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

3.

OS-RC-2-RNA-seq

Organism:
Homo sapiens
Source name:
OS-RC-2-RNA-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED, TXT
Sample
Accession:
GSM1093061
ID:
301093061

SRA Run Selector

4.

786-O-RNA-seq

Organism:
Homo sapiens
Source name:
786-O-RNA-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED, TXT
Sample
Accession:
GSM1093060
ID:
301093060

SRA Run Selector

5.

OS-RC-2-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
OS-RC-2-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093059
ID:
301093059

SRA Run Selector

6.

T24-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
T24-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093058
ID:
301093058

SRA Run Selector

7.

NCl-H1395-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
NCl-H1395-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093057
ID:
301093057

SRA Run Selector

8.

HCC827-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
HCC827-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093056
ID:
301093056

SRA Run Selector

9.

786-O-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
786-O-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093055
ID:
301093055

SRA Run Selector

10.

AGS-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
AGS-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093054
ID:
301093054

SRA Run Selector

11.

BGC-823-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
BGC-823-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093053
ID:
301093053

SRA Run Selector

12.

5637-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
5637-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093052
ID:
301093052

SRA Run Selector

13.

YH-rep-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
YH-rep-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093051
ID:
301093051

SRA Run Selector

14.

YH-LHC-BS-promoter-seq

Organism:
Homo sapiens
Source name:
YH-LHC-BS-promoter-seq
Platform:
GPL11154
Series:
GSE44866
Download data: BED
Sample
Accession:
GSM1093050
ID:
301093050

SRA Run Selector

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