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Items: 20

1.

LncRNA DEANR1 facilitates human endoderm differentiation by activating FOXA2 expression

(Submitter supplied) Long non-coding RNAs (lncRNAs) regulate diverse biological processes including cell lineage specification. Here we report transcriptome profiling of human endoderm and pancreatic cell lineages using purified cell populations. Analysis of the data sets allowed the identification of hundreds of lncRNAs exhibiting differentiation stage-specific expression patterns. As a first step in characterizing these lncRNAs, we focus on an endoderm-specific lncRNA DEANR1 (Definitive Endoderm Associated long Non-coding RNA1) and demonstrate that it plays an important role in human endoderm differentiation. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL11154 GPL16791
17 Samples
Download data: TXT
Series
Accession:
GSE44875
ID:
200044875

PubMed Full text in PMC Similar studies Analyze with GEO2RSRA Run Selector

2.

Illumina HiSeq 2500 (Homo sapiens)

Organism:
Homo sapiens
11802 Series
336451 Samples
Download data
Platform
Accession:
GPL16791
ID:
100016791

3.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10400 Series
180082 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

4.

DEANR1KD_2

Organism:
Homo sapiens
Source name:
differentiated DEANR1-knockdown endoderm cells
Platform:
GPL16791
Series:
GSE44875
Download data
Sample
Accession:
GSM1654312
ID:
301654312

SRA Run Selector

5.

DEANR1KD_1

Organism:
Homo sapiens
Source name:
differentiated DEANR1-knockdown endoderm cells
Platform:
GPL16791
Series:
GSE44875
Download data
Sample
Accession:
GSM1654311
ID:
301654311

SRA Run Selector

6.

FOXA2KD_2

Organism:
Homo sapiens
Source name:
differentiated FOXA2-knockdown endoderm cells
Platform:
GPL16791
Series:
GSE44875
Download data
Sample
Accession:
GSM1654310
ID:
301654310

SRA Run Selector

7.

FOXA2KD_1

Organism:
Homo sapiens
Source name:
differentiated FOXA2-knockdown endoderm cells
Platform:
GPL16791
Series:
GSE44875
Download data
Sample
Accession:
GSM1654309
ID:
301654309

SRA Run Selector

8.

WT_2

Organism:
Homo sapiens
Source name:
differentiated endoderm cells
Platform:
GPL16791
Series:
GSE44875
Download data
Sample
Accession:
GSM1654308
ID:
301654308

SRA Run Selector

9.

WT_1

Organism:
Homo sapiens
Source name:
differentiated endoderm cells
Platform:
GPL16791
Series:
GSE44875
Download data
Sample
Accession:
GSM1654307
ID:
301654307

SRA Run Selector

10.

ES1

Organism:
Homo sapiens
Source name:
human embryonic stem cells
Platform:
GPL11154
Series:
GSE44875
Download data
Sample
Accession:
GSM1306651
ID:
301306651

SRA Run Selector

11.

beta2

Organism:
Homo sapiens
Source name:
human pancreatic beta cells
Platform:
GPL11154
Series:
GSE44875
Download data
Sample
Accession:
GSM1093238
ID:
301093238

SRA Run Selector

12.

beta1

Organism:
Homo sapiens
Source name:
human pancreatic beta cells
Platform:
GPL11154
Series:
GSE44875
Download data
Sample
Accession:
GSM1093237
ID:
301093237

SRA Run Selector

13.

alpha2

Organism:
Homo sapiens
Source name:
human pancreatic alpha cells
Platform:
GPL11154
Series:
GSE44875
Download data
Sample
Accession:
GSM1093236
ID:
301093236

SRA Run Selector

14.

alpha1

Organism:
Homo sapiens
Source name:
human pancreatic alpha cells
Platform:
GPL11154
Series:
GSE44875
Download data
Sample
Accession:
GSM1093235
ID:
301093235

SRA Run Selector

15.

PP3

Organism:
Homo sapiens
Source name:
pancreatic progenitors cells
Platform:
GPL11154
Series:
GSE44875
Download data
Sample
Accession:
GSM1093234
ID:
301093234

SRA Run Selector

16.

PP2

Organism:
Homo sapiens
Source name:
pancreatic progenitors cells
Platform:
GPL11154
Series:
GSE44875
Download data
Sample
Accession:
GSM1093233
ID:
301093233

SRA Run Selector

17.

PP1

Organism:
Homo sapiens
Source name:
pancreatic progenitors cells
Platform:
GPL11154
Series:
GSE44875
Download data
Sample
Accession:
GSM1093232
ID:
301093232

SRA Run Selector

18.

DE2

Organism:
Homo sapiens
Source name:
definitive endoderm cells
Platform:
GPL11154
Series:
GSE44875
Download data
Sample
Accession:
GSM1093231
ID:
301093231

SRA Run Selector

19.

DE1

Organism:
Homo sapiens
Source name:
definitive endoderm cells
Platform:
GPL11154
Series:
GSE44875
Download data
Sample
Accession:
GSM1093230
ID:
301093230

SRA Run Selector

20.

ES2

Organism:
Homo sapiens
Source name:
undifferentiated human ESCs
Platform:
GPL11154
Series:
GSE44875
Download data
Sample
Accession:
GSM1093229
ID:
301093229

SRA Run Selector

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