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Items: 1 to 20 of 26

1.

Laser Capture Microdissection-Reduced Representation Bisulfite Sequencing (LCM-RRBS) maps changes in DNA methylation associated with gonadectomy-induced adrenocortical neoplasia in the mouse

(Submitter supplied) DNA methylation is a mechanism for long-term transcriptional regulation and is required for normal cellular differentiation. Failure to properly establish or maintain DNA methylation patterns leads to cell dysfunction and diseases such as cancer. Identifying DNA methylation signatures in complex tissues can be challenging due to inaccurate cell enrichment methods and low DNA yields. We have developed a technique called Laser Capture Microdissection-Reduced Representation Bisulfite Sequencing (LCM-RRBS) for the multiplexed interrogation of the DNA methylation status of CpG Islands and promoters. more...
Organism:
Homo sapiens; Mus musculus
Type:
Methylation profiling by high throughput sequencing
Platforms:
GPL11154 GPL13112
23 Samples
Download data: BED, TXT
Series
Accession:
GSE45361
ID:
200045361
2.

Illumina HiSeq 2000 (Mus musculus)

Platform
Accession:
GPL13112
ID:
100013112
3.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
4.

Leukocyte RRBS 400ng

Organism:
Homo sapiens
Source name:
Leukocyte RRBS 400ng
Platform:
GPL11154
Series:
GSE45361
Download data: BED
Sample
Accession:
GSM1103090
ID:
301103090
5.

Liver RRBS 400 ng Replicate 3

Organism:
Mus musculus
Source name:
Liver RRBS 400 ng Replicate 3
Platform:
GPL13112
Series:
GSE45361
Download data: BED
Sample
Accession:
GSM1103101
ID:
301103101
6.

Leukocyte LCMRRBS 1ng

Organism:
Homo sapiens
Source name:
Leukocyte LCMRRBS 1ng
Platform:
GPL11154
Series:
GSE45361
Download data: BED
Sample
Accession:
GSM1103089
ID:
301103089
7.

Liver RRBS 400 ng Replicate 2

Organism:
Mus musculus
Source name:
Liver RRBS 400 ng Replicate 2
Platform:
GPL13112
Series:
GSE45361
Download data: BED
Sample
Accession:
GSM1103100
ID:
301103100
8.

Endometrial Fresh Frozen Rep 2

Organism:
Homo sapiens
Source name:
Endometrial Fresh Frozen Rep 2
Platform:
GPL11154
Series:
GSE45361
Download data: BED
Sample
Accession:
GSM1103088
ID:
301103088
9.

Liver RRBS 400 ng Replicate 1

Organism:
Mus musculus
Source name:
Liver RRBS 400 ng Replicate 1
Platform:
GPL13112
Series:
GSE45361
Download data: BED
Sample
Accession:
GSM1103099
ID:
301103099
10.

Endometrial Fresh Frozen Rep 1

Organism:
Homo sapiens
Source name:
Endometrial Fresh Frozen Rep 1
Platform:
GPL11154
Series:
GSE45361
Download data: BED
Sample
Accession:
GSM1103087
ID:
301103087
11.

Liver LCMRRBS Fresh Frozen 5mm2

Organism:
Mus musculus
Source name:
Liver LCMRRBS Fresh Frozen 5mm2
Platform:
GPL13112
Series:
GSE45361
Download data: BED
Sample
Accession:
GSM1103098
ID:
301103098
12.

Endometrial FFPE Rep 2

Organism:
Homo sapiens
Source name:
Endometrial FFPE Rep 2
Platform:
GPL11154
Series:
GSE45361
Download data: BED
Sample
Accession:
GSM1103086
ID:
301103086
13.

Liver LCMRRBS Fresh Frozen 2mm2

Organism:
Mus musculus
Source name:
Liver LCMRRBS Fresh Frozen 2mm2
Platform:
GPL13112
Series:
GSE45361
Download data: BED
Sample
Accession:
GSM1103097
ID:
301103097
14.

Endometrial FFPE Rep 1

Organism:
Homo sapiens
Source name:
Endometrial FFPE Rep 1
Platform:
GPL11154
Series:
GSE45361
Download data: BED
Sample
Accession:
GSM1103085
ID:
301103085
15.

Liver LCMRRBS Fresh Frozen 20mm

Organism:
Mus musculus
Source name:
Liver LCMRRBS Fresh Frozen 20mm
Platform:
GPL13112
Series:
GSE45361
Download data: BED
Sample
Accession:
GSM1103096
ID:
301103096
16.

Liver LCMRRBS Fresh Frozen 10mm2

Organism:
Mus musculus
Source name:
Liver LCMRRBS Fresh Frozen 10mm2
Platform:
GPL13112
Series:
GSE45361
Download data: BED
Sample
Accession:
GSM1103095
ID:
301103095
17.

Liver LCMRRBS FFPE 20mm2

Organism:
Mus musculus
Source name:
Liver LCMRRBS FFPE 20mm2
Platform:
GPL13112
Series:
GSE45361
Download data: BED
Sample
Accession:
GSM1103094
ID:
301103094
18.

Liver LCMRRBS 1 ng Replicate 3

Organism:
Mus musculus
Source name:
Liver LCMRRBS 1 ng Replicate 3
Platform:
GPL13112
Series:
GSE45361
Download data: BED
Sample
Accession:
GSM1103093
ID:
301103093
19.

Liver LCMRRBS 1 ng Replicate 2

Organism:
Mus musculus
Source name:
Liver LCMRRBS 1 ng Replicate 2
Platform:
GPL13112
Series:
GSE45361
Download data: BED
Sample
Accession:
GSM1103092
ID:
301103092
20.

Liver LCMRRBS 1 ng Replicate 1

Organism:
Mus musculus
Source name:
Liver LCMRRBS 1 ng Replicate 1
Platform:
GPL13112
Series:
GSE45361
Download data: BED
Sample
Accession:
GSM1103091
ID:
301103091
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Supplemental Content

db=gds|term=GSE45361[Accession]|query=1|qty=3|blobid=MCID_6642e6735f31ac49117aaccf|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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