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Items: 13

1.

Transcriptional and Epigenetic Dynamics During Specification of Human Embryonic Stem Cells

(Submitter supplied) Differentiation of human embryonic stem cells (hESCs) provides a unique opportunity to study the epigenetic mechanisms that facilitate cellular transitions in a human context. To that end, we performed comprehensive transcriptional and epigenetic profiling of early populations derived through directed differentiation of hESCs representing each of the three embryonic germ layers. Integration of whole genome bisulfite sequencing, chromatin immunoprecipitation-sequencing and RNA-Sequencing reveals unique events associated with specification towards each lineage. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platforms:
GPL11154 GPL16791
10 Samples
Download data: BED, GTF
2.

Illumina HiSeq 2500 (Homo sapiens)

Platform
Accession:
GPL16791
ID:
100016791
3.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
4.

Nanog ChIP in hES line HUES64 rep2

Organism:
Homo sapiens
Source name:
hES HUES64
Platform:
GPL11154
Series:
GSE46130
Download data: BED
Sample
Accession:
GSM1124071
ID:
301124071
5.

Nanog ChIP in hES line HUES64 rep1

Organism:
Homo sapiens
Source name:
hES HUES64
Platform:
GPL11154
Series:
GSE46130
Download data: BED
Sample
Accession:
GSM1124070
ID:
301124070
6.

SOX2 ChIP in hES line HUES64 rep2

Organism:
Homo sapiens
Source name:
hES HUES64
Platform:
GPL11154
Series:
GSE46130
Download data: BED
Sample
Accession:
GSM1124069
ID:
301124069
7.

SOX2 ChIP in hES line HUES64 rep1

Organism:
Homo sapiens
Source name:
hES HUES64
Platform:
GPL11154
Series:
GSE46130
Download data: BED
Sample
Accession:
GSM1124068
ID:
301124068
8.

POU5F1 ChIP in hES line HUES64

Organism:
Homo sapiens
Source name:
hES HUES64
Platform:
GPL11154
Series:
GSE46130
Download data: BED
Sample
Accession:
GSM1124067
ID:
301124067
9.

FOXA2 ChIP followed by bisulfite sequencing in in vitro derived endoderm rep2

Organism:
Homo sapiens
Source name:
in vitro derived endoderm
Platform:
GPL11154
Series:
GSE46130
Download data: BED
Sample
Accession:
GSM1124066
ID:
301124066
10.

FOXA2 ChIP followed by bisulfite sequencing in in vitro derived endoderm rep1

Organism:
Homo sapiens
Source name:
in vitro derived endoderm
Platform:
GPL11154
Series:
GSE46130
Download data: BED
Sample
Accession:
GSM1124065
ID:
301124065
11.

FOXA2 ChIP in in vitro derived endoderm rep2

Organism:
Homo sapiens
Source name:
in vitro derived endoderm
Platform:
GPL11154
Series:
GSE46130
Download data: BED
Sample
Accession:
GSM1124064
ID:
301124064
12.

FOXA2 ChIP in in vitro derived endoderm rep1

Organism:
Homo sapiens
Source name:
in vitro derived endoderm
Platform:
GPL11154
Series:
GSE46130
Download data: BED
Sample
Accession:
GSM1124063
ID:
301124063
13.

Hepatoblast derived from HUES64 RNA-Seq reps1and2

Organism:
Homo sapiens
Source name:
in vitro derived hepatoblast
Platform:
GPL16791
Series:
GSE46130
Download data: GTF
Sample
Accession:
GSM1124072
ID:
301124072
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Supplemental Content

db=gds|term=GSE46130[Accession]|query=1|qty=2|blobid=MCID_6642e8de5f31ac49117aef58|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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