GSE47774[Accession] - GEO DataSets - NCBI

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Select item 2000477741.

A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequence Quality Control consortium

(Submitter supplied) We present primary results from the Sequencing Quality Control (SEQC) project, coordinated by the United States Food and Drug Administration. Examining Illumina HiSeq, Life Technologies SOLiD and Roche 454 platforms at multiple laboratory sites using reference RNA samples with built-in controls, we assess RNA sequencing (RNA-seq) performance for sequence discovery and differential expression profiling and compare it to microarray and quantitative PCR (qPCR) data using complementary metrics. more...

Organism:: Homo sapiens; synthetic construct

Type:: Expression profiling by high throughput sequencing

5 related Platforms
3396 Samples

Download data: TXT

Series

Accession:: GSE47774

ID:: 200047774

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000172782.

AB 5500 Genetic Analyzer (synthetic construct)

Organism:: synthetic construct

2 Series
154 Samples

Platform

Accession:: GPL17278

ID:: 100017278

Select item 1000165583.

AB 5500 Genetic Analyzer (Homo sapiens)

Organism:: Homo sapiens

46 Series
1471 Samples

Platform

Accession:: GPL16558

ID:: 100016558

Select item 1000152284.

Illumina HiSeq 2000 (synthetic construct)

Organism:: synthetic construct

49 Series
1918 Samples

Platform

Accession:: GPL15228

ID:: 100015228

Select item 1000146035.

454 GS FLX Titanium (Homo sapiens)

Organism:: Homo sapiens

13 Series
146 Samples

Platform

Accession:: GPL14603

ID:: 100014603

Select item 1000111546.

Illumina HiSeq 2000 (Homo sapiens)

Organism:: Homo sapiens

10400 Series
180082 Samples

Platform

Accession:: GPL11154

ID:: 100011154

Select item 3015293937.

Organism:: Homo sapiens

Source name:: neuroblastoma

Platform:: GPL11154
Series:: GSE47774 GSE62564

Sample

Accession:: GSM1529393

ID:: 301529393

Select item 3015293928.

Organism:: Homo sapiens

Source name:: neuroblastoma

Platform:: GPL11154
Series:: GSE47774 GSE62564

Sample

Accession:: GSM1529392

ID:: 301529392

Select item 3015293919.

Organism:: Homo sapiens

Source name:: neuroblastoma

Platform:: GPL11154
Series:: GSE47774 GSE62564

Sample

Accession:: GSM1529391

ID:: 301529391

Select item 30152939010.

Organism:: Homo sapiens

Source name:: neuroblastoma

Platform:: GPL11154
Series:: GSE47774 GSE62564

Sample

Accession:: GSM1529390

ID:: 301529390

Select item 30152938911.

Organism:: Homo sapiens

Source name:: neuroblastoma

Platform:: GPL11154
Series:: GSE47774 GSE62564

Sample

Accession:: GSM1529389

ID:: 301529389

Select item 30152938812.

Organism:: Homo sapiens

Source name:: neuroblastoma

Platform:: GPL11154
Series:: GSE47774 GSE62564

Sample

Accession:: GSM1529388

ID:: 301529388

Select item 30152938713.

Organism:: Homo sapiens

Source name:: neuroblastoma

Platform:: GPL11154
Series:: GSE47774 GSE62564

Sample

Accession:: GSM1529387

ID:: 301529387

Select item 30152938614.

Organism:: Homo sapiens

Source name:: neuroblastoma

Platform:: GPL11154
Series:: GSE47774 GSE62564

Sample

Accession:: GSM1529386

ID:: 301529386

Select item 30152938515.

Organism:: Homo sapiens

Source name:: neuroblastoma

Platform:: GPL11154
Series:: GSE47774 GSE62564

Sample

Accession:: GSM1529385

ID:: 301529385

Select item 30152938416.

Organism:: Homo sapiens

Source name:: neuroblastoma

Platform:: GPL11154
Series:: GSE47774 GSE62564

Sample

Accession:: GSM1529384

ID:: 301529384

Select item 30152938317.

Organism:: Homo sapiens

Source name:: neuroblastoma

Platform:: GPL11154
Series:: GSE47774 GSE62564

Sample

Accession:: GSM1529383

ID:: 301529383

Select item 30152938218.

Organism:: Homo sapiens

Source name:: neuroblastoma

Platform:: GPL11154
Series:: GSE47774 GSE62564

Sample

Accession:: GSM1529382

ID:: 301529382

Select item 30152938119.

Organism:: Homo sapiens

Source name:: neuroblastoma

Platform:: GPL11154
Series:: GSE47774 GSE62564

Sample

Accession:: GSM1529381

ID:: 301529381

Select item 30152938020.

Organism:: Homo sapiens

Source name:: neuroblastoma

Platform:: GPL11154
Series:: GSE47774 GSE62564

Sample

Accession:: GSM1529380

ID:: 301529380

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