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Items: 15

1.

Histone variant H3.3-specific readout of H3K36 trimethylation by ZMYND11 links transcription elongation control to tumour suppression

(Submitter supplied) Recognition of modified histones by “reader” proteins plays a critical role in the regulation of transcription1. H3K36 trimethylation (H3K36me3) is deposited onto the nucleosomes in the transcribed regions following RNA polymerase II (Pol II) elongation. In yeast, this mark in turn recruits epigenetic regulators to reset the chromatin at an appropriate state to suppress cryptic transcription2,3. However, much less is known about the role of H3K36me3 in transcription regulation in mammals. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platform:
GPL11154
13 Samples
Download data: TXT, WIG
Series
Accession:
GSE48423
ID:
200048423

PubMed Full text in PMC Similar studies Analyze with GEO2RSRA Run Selector

2.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10400 Series
180082 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

3.

RNAseq_shZMYND11-2

Organism:
Homo sapiens
Source name:
U2OS cells
Platform:
GPL11154
Series:
GSE48423
Download data: TXT
Sample
Accession:
GSM1177775
ID:
301177775

SRA Run Selector

4.

RNAseq_shZMYND11-1

Organism:
Homo sapiens
Source name:
U2OS cells
Platform:
GPL11154
Series:
GSE48423
Download data: TXT
Sample
Accession:
GSM1177774
ID:
301177774

SRA Run Selector

5.

RNAseq_shCTRL

Organism:
Homo sapiens
Source name:
U2OS cells
Platform:
GPL11154
Series:
GSE48423
Download data: TXT
Sample
Accession:
GSM1177773
ID:
301177773

SRA Run Selector

6.

ChIPseq_S2P-shZM11

Organism:
Homo sapiens
Source name:
U2OS cells
Platform:
GPL11154
Series:
GSE48423
Download data: WIG
Sample
Accession:
GSM1177772
ID:
301177772

SRA Run Selector

7.

ChIPseq_S2P-shCTRL

Organism:
Homo sapiens
Source name:
U2OS cells
Platform:
GPL11154
Series:
GSE48423
Download data: WIG
Sample
Accession:
GSM1177771
ID:
301177771

SRA Run Selector

8.

ChIPseq_POLII-shZM11

Organism:
Homo sapiens
Source name:
U2OS cells
Platform:
GPL11154
Series:
GSE48423
Download data: WIG
Sample
Accession:
GSM1177770
ID:
301177770

SRA Run Selector

9.

ChIPseq_POLII-shCTRL

Organism:
Homo sapiens
Source name:
U2OS cells
Platform:
GPL11154
Series:
GSE48423
Download data: WIG
Sample
Accession:
GSM1177769
ID:
301177769

SRA Run Selector

10.

ChIPseq_H3K36me3-shZM11

Organism:
Homo sapiens
Source name:
U2OS cells
Platform:
GPL11154
Series:
GSE48423
Download data: WIG
Sample
Accession:
GSM1177768
ID:
301177768

SRA Run Selector

11.

ChIPseq_H3K36me3-shCTRL

Organism:
Homo sapiens
Source name:
U2OS cells
Platform:
GPL11154
Series:
GSE48423
Download data: WIG
Sample
Accession:
GSM1177767
ID:
301177767

SRA Run Selector

12.

ChIPseq_Flag-H3.3

Organism:
Homo sapiens
Source name:
U2OS cells
Platform:
GPL11154
Series:
GSE48423
Download data: WIG
Sample
Accession:
GSM1177766
ID:
301177766

SRA Run Selector

13.

ChIPseq_ZNYMD11-shZM11

Organism:
Homo sapiens
Source name:
U2OS cells
Platform:
GPL11154
Series:
GSE48423
Download data: WIG
Sample
Accession:
GSM1177765
ID:
301177765

SRA Run Selector

14.

ChIPseq_ZNYMD11-shCTRL

Organism:
Homo sapiens
Source name:
U2OS cells
Platform:
GPL11154
Series:
GSE48423
Download data: WIG
Sample
Accession:
GSM1177764
ID:
301177764

SRA Run Selector

15.

ChIPseq_ZNYMD11

Organism:
Homo sapiens
Source name:
U2OS cells
Platform:
GPL11154
Series:
GSE48423
Download data: WIG
Sample
Accession:
GSM1177763
ID:
301177763

SRA Run Selector

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