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Items: 1 to 20 of 119

1.

SEQC Toxicogenomics Study: RNA-Seq data set

(Submitter supplied) The comparative advantages of RNA-Seq and microarrays in transcriptome profiling were evaluated in the context of a comprehensive study design. Gene expression data from Illumina RNA-Seq and Affymetrix microarrays were obtained from livers of rats exposed to 27 agents that comprised of seven modes of action (MOAs); they were split into training and test sets and verified with real time PCR.
Organism:
Rattus norvegicus
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL17116 GPL14844
116 Samples
Download data: PDF, TXT
Series
Accession:
GSE55347
ID:
200055347

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiScanSQ (Rattus norvegicus)

Organism:
Rattus norvegicus
8 Series
306 Samples
Download data
Platform
Accession:
GPL17116
ID:
100017116

3.

Illumina HiSeq 2000 (Rattus norvegicus)

Organism:
Rattus norvegicus
328 Series
6605 Samples
Download data
Platform
Accession:
GPL14844
ID:
100014844

4.

In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_578_CTTGTA_s_8)

Organism:
Rattus norvegicus
Source name:
Liver
Platform:
GPL17116
Series:
GSE47792 GSE55347
Download data
Sample
Accession:
GSM1336284
ID:
301336284

SRA Run Selector

5.

In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_577_CAGATC_s_8)

Organism:
Rattus norvegicus
Source name:
Liver
Platform:
GPL17116
Series:
GSE47792 GSE55347
Download data
Sample
Accession:
GSM1336283
ID:
301336283

SRA Run Selector

6.

In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_576_GCCAAT_s_8)

Organism:
Rattus norvegicus
Source name:
Liver
Platform:
GPL17116
Series:
GSE47792 GSE55347
Download data
Sample
Accession:
GSM1336282
ID:
301336282

SRA Run Selector

7.

In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_575_ACAGTG_s_8)

Organism:
Rattus norvegicus
Source name:
Liver
Platform:
GPL17116
Series:
GSE47792 GSE55347
Download data
Sample
Accession:
GSM1336281
ID:
301336281

SRA Run Selector

8.

In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_574_TGACCA_s_8)

Organism:
Rattus norvegicus
Source name:
Liver
Platform:
GPL17116
Series:
GSE47792 GSE55347
Download data
Sample
Accession:
GSM1336280
ID:
301336280

SRA Run Selector

9.

In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_573_CGATGT_s_8)

Organism:
Rattus norvegicus
Source name:
Liver
Platform:
GPL17116
Series:
GSE47792 GSE55347
Download data
Sample
Accession:
GSM1336279
ID:
301336279

SRA Run Selector

10.

In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_572_CTTGTA_s_7)

Organism:
Rattus norvegicus
Source name:
Liver
Platform:
GPL17116
Series:
GSE47792 GSE55347
Download data
Sample
Accession:
GSM1336278
ID:
301336278

SRA Run Selector

11.

In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_571_CAGATC_s_7)

Organism:
Rattus norvegicus
Source name:
Liver
Platform:
GPL17116
Series:
GSE47792 GSE55347
Download data
Sample
Accession:
GSM1336277
ID:
301336277

SRA Run Selector

12.

In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_570_GCCAAT_s_7)

Organism:
Rattus norvegicus
Source name:
Liver
Platform:
GPL17116
Series:
GSE47792 GSE55347
Download data
Sample
Accession:
GSM1336276
ID:
301336276

SRA Run Selector

13.

In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_569_ACAGTG_s_7)

Organism:
Rattus norvegicus
Source name:
Liver
Platform:
GPL17116
Series:
GSE47792 GSE55347
Download data
Sample
Accession:
GSM1336275
ID:
301336275

SRA Run Selector

14.

In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_568_TGACCA_s_7)

Organism:
Rattus norvegicus
Source name:
Liver
Platform:
GPL17116
Series:
GSE47792 GSE55347
Download data
Sample
Accession:
GSM1336274
ID:
301336274

SRA Run Selector

15.

In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_567_CGATGT_s_7)

Organism:
Rattus norvegicus
Source name:
Liver
Platform:
GPL17116
Series:
GSE47792 GSE55347
Download data
Sample
Accession:
GSM1336273
ID:
301336273

SRA Run Selector

16.

In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_566_CTTGTA_s_6)

Organism:
Rattus norvegicus
Source name:
Liver
Platform:
GPL17116
Series:
GSE47792 GSE55347
Download data
Sample
Accession:
GSM1336272
ID:
301336272

SRA Run Selector

17.

In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_565_CAGATC_s_6)

Organism:
Rattus norvegicus
Source name:
Liver
Platform:
GPL17116
Series:
GSE47792 GSE55347
Download data
Sample
Accession:
GSM1336271
ID:
301336271

SRA Run Selector

18.

In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_564_GCCAAT_s_6)

Organism:
Rattus norvegicus
Source name:
Liver
Platform:
GPL17116
Series:
GSE47792 GSE55347
Download data
Sample
Accession:
GSM1336270
ID:
301336270

SRA Run Selector

19.

In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_563_ACAGTG_s_6)

Organism:
Rattus norvegicus
Source name:
Liver
Platform:
GPL17116
Series:
GSE47792 GSE55347
Download data
Sample
Accession:
GSM1336269
ID:
301336269

SRA Run Selector

20.

In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_562_TGACCA_s_6)

Organism:
Rattus norvegicus
Source name:
Liver
Platform:
GPL17116
Series:
GSE47792 GSE55347
Download data
Sample
Accession:
GSM1336268
ID:
301336268

SRA Run Selector

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