GEO DataSets

(Submitter supplied) 24,537 non-repetitive sequences that are greater than 100 bps within the 44 ENCODE regions were PCR amplified. All the purified PCR products in a total of 66 384-well plates were spoted on glass slide using a contact printer. There are a total of 48 blocks, with 23 x 23 dimension in each array. Keywords = ENCODE Keywords = PCR tiling array Keywords = Bing Ren

Organism:

Homo sapiens

12 Series

280 Samples

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(Submitter supplied) The 38 genome scan arrays were based on NCBI35 build of the human genome (hg17) and contained a total of 14,628,366 50-mer oligonucleotides, positioned at every 100 basepairs (bp) throughout the human genome as described in the oligonucleotide array description files. There are a total of 38 arrays. This is set 09. Protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).

Organism:

Homo sapiens

2 Series

2 Samples

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(Submitter supplied) The 38 genome scan arrays were based on NCBI35 build of the human genome (hg17) and contained a total of 14,628,366 50-mer oligonucleotides, positioned at every 100 basepairs (bp) throughout the human genome as described in the oligonucleotide array description files. There are a total of 38 arrays. This is set 08. Protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).

Organism:

Homo sapiens

2 Series

2 Samples

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(Submitter supplied) The 38 genome scan arrays were based on NCBI35 build of the human genome (hg17) and contained a total of 14,628,366 50-mer oligonucleotides, positioned at every 100 basepairs (bp) throughout the human genome as described in the oligonucleotide array description files. There are a total of 38 arrays. This is set 07. Protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).

Organism:

Homo sapiens

2 Series

2 Samples

Download data

(Submitter supplied) The 38 genome scan arrays were based on NCBI35 build of the human genome (hg17) and contained a total of 14,628,366 50-mer oligonucleotides, positioned at every 100 basepairs (bp) throughout the human genome as described in the oligonucleotide array description files. There are a total of 38 arrays. This is set 06. Protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).

Organism:

Homo sapiens

2 Series

2 Samples

Download data

(Submitter supplied) The 38 genome scan arrays were based on NCBI35 build of the human genome (hg17) and contained a total of 14,628,366 50-mer oligonucleotides, positioned at every 100 basepairs (bp) throughout the human genome as described in the oligonucleotide array description files. There are a total of 38 arrays. This is set 05. Protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).

Organism:

Homo sapiens

2 Series

2 Samples

Download data

(Submitter supplied) The 38 genome scan arrays were based on NCBI35 build of the human genome (hg17) and contained a total of 14,628,366 50-mer oligonucleotides, positioned at every 100 basepairs (bp) throughout the human genome as described in the oligonucleotide array description files. There are a total of 38 arrays. This is set 04. Protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).

Organism:

Homo sapiens

2 Series

2 Samples

Download data

(Submitter supplied) The 38 genome scan arrays were based on NCBI35 build of the human genome (hg17) and contained a total of 14,628,366 50-mer oligonucleotides, positioned at every 100 basepairs (bp) throughout the human genome as described in the oligonucleotide array description files. There are a total of 38 arrays. This is set 03. Protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).

Organism:

Homo sapiens

2 Series

2 Samples

Download data

(Submitter supplied) The 38 genome scan arrays were based on NCBI35 build of the human genome (hg17) and contained a total of 14,628,366 50-mer oligonucleotides, positioned at every 100 basepairs (bp) throughout the human genome as described in the oligonucleotide array description files. There are a total of 38 arrays. This is set 02. Protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).

Organism:

Homo sapiens

2 Series

2 Samples

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(Submitter supplied) A condensed array was used to verify the results from the whole genome scan arrays. It contained a total of 742,156 oligonucleotides to represent the 15,221 putative CTCF binding sequences plus 44 ENCODE regions, each ranging in size from 500 Kbp to 1.9 Mbp at 100 bp resolution. Each of the 15,221 binding sites were extended at both ends by 2.5 Kbp upstream and downstream of the site. Protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).

Organism:

Homo sapiens

1 Series

1 Sample

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(Submitter supplied) The 38 genome scan arrays were based on NCBI35 build of the human genome (hg17) and contained a total of 14,628,366 50-mer oligonucleotides, positioned at every 100 basepairs (bp) throughout the human genome as described in the oligonucleotide array description files. There are a total of 38 arrays. This is set 38. Protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).

Organism:

Homo sapiens

2 Series

2 Samples

Download data

(Submitter supplied) The 38 genome scan arrays were based on NCBI35 build of the human genome (hg17) and contained a total of 14,628,366 50-mer oligonucleotides, positioned at every 100 basepairs (bp) throughout the human genome as described in the oligonucleotide array description files. There are a total of 38 arrays. This is set 37. Protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).

Organism:

Homo sapiens

2 Series

2 Samples

Download data

(Submitter supplied) The 38 genome scan arrays were based on NCBI35 build of the human genome (hg17) and contained a total of 14,628,366 50-mer oligonucleotides, positioned at every 100 basepairs (bp) throughout the human genome as described in the oligonucleotide array description files. There are a total of 38 arrays. This is set 36. Protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).

Organism:

Homo sapiens

2 Series

2 Samples

Download data

(Submitter supplied) The 38 genome scan arrays were based on NCBI35 build of the human genome (hg17) and contained a total of 14,628,366 50-mer oligonucleotides, positioned at every 100 basepairs (bp) throughout the human genome as described in the oligonucleotide array description files. There are a total of 38 arrays. This is set 35. Protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).

Organism:

Homo sapiens

2 Series

2 Samples

Download data

(Submitter supplied) The 38 genome scan arrays were based on NCBI35 build of the human genome (hg17) and contained a total of 14,628,366 50-mer oligonucleotides, positioned at every 100 basepairs (bp) throughout the human genome as described in the oligonucleotide array description files. There are a total of 38 arrays. This is set 34. Protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).

Organism:

Homo sapiens

2 Series

2 Samples

Download data

(Submitter supplied) The 38 genome scan arrays were based on NCBI35 build of the human genome (hg17) and contained a total of 14,628,366 50-mer oligonucleotides, positioned at every 100 basepairs (bp) throughout the human genome as described in the oligonucleotide array description files. There are a total of 38 arrays. This is set 33. Protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).

Organism:

Homo sapiens

2 Series

2 Samples

Download data

(Submitter supplied) The 38 genome scan arrays were based on NCBI35 build of the human genome (hg17) and contained a total of 14,628,366 50-mer oligonucleotides, positioned at every 100 basepairs (bp) throughout the human genome as described in the oligonucleotide array description files. There are a total of 38 arrays. This is set 32. Protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).

Organism:

Homo sapiens

2 Series

2 Samples

Download data

(Submitter supplied) The 38 genome scan arrays were based on NCBI35 build of the human genome (hg17) and contained a total of 14,628,366 50-mer oligonucleotides, positioned at every 100 basepairs (bp) throughout the human genome as described in the oligonucleotide array description files. There are a total of 38 arrays. This is set 31. Protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).

Organism:

Homo sapiens

2 Series

2 Samples

Download data

(Submitter supplied) The 38 genome scan arrays were based on NCBI35 build of the human genome (hg17) and contained a total of 14,628,366 50-mer oligonucleotides, positioned at every 100 basepairs (bp) throughout the human genome as described in the oligonucleotide array description files. There are a total of 38 arrays. This is set 30. Protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).

Organism:

Homo sapiens

2 Series

2 Samples

Download data

(Submitter supplied) The 38 genome scan arrays were based on NCBI35 build of the human genome (hg17) and contained a total of 14,628,366 50-mer oligonucleotides, positioned at every 100 basepairs (bp) throughout the human genome as described in the oligonucleotide array description files. There are a total of 38 arrays. This is set 29. Protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).

Organism:

Homo sapiens

2 Series

2 Samples

Download data