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Items: 1 to 20 of 26

1.

A global regulatory mechanism for activating an exon network required for neurogenesis

(Submitter supplied) The vertebrate and neural-specific SR-related protein nSR100/SRRM4 regulates an extensive program of alternative splicing with critical roles in nervous system development. However, the mechanism by which nSR100 controls its target exons is poorly understood. We demonstrate that nSR100-dependent neural exons are associated with a unique configuration of intronic cis-elements that promote rapid switch-like regulation during neurogenesis. more...
Organism:
Mus musculus; Homo sapiens
Type:
Expression profiling by high throughput sequencing; Other
Platforms:
GPL16791 GPL17021 GPL11154
22 Samples
Download data: BEDGRAPH, TXT
Series
Accession:
GSE57278
ID:
200057278

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2500 (Mus musculus)

Organism:
Mus musculus
10763 Series
293492 Samples
Download data
Platform
Accession:
GPL17021
ID:
100017021

3.

Illumina HiSeq 2500 (Homo sapiens)

Organism:
Homo sapiens
11830 Series
336732 Samples
Download data
Platform
Accession:
GPL16791
ID:
100016791

4.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10410 Series
180450 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

5.

nSR100-iCLIP-hs

Organism:
Homo sapiens
Source name:
293T, dox-inducible
Platform:
GPL16791
Series:
GSE57278
Download data: BEDGRAPH
Sample
Accession:
GSM1486179
ID:
301486179

SRA Run Selector

6.

PTBP1-iCLIP_ plus nSR100

Organism:
Homo sapiens
Source name:
293T, dox-inducible
Platform:
GPL16791
Series:
GSE57278
Download data: BEDGRAPH
Sample
Accession:
GSM1486178
ID:
301486178

SRA Run Selector

7.

PTBP1-iCLIP_no nSR100

Organism:
Homo sapiens
Source name:
293T, dox-inducible
Platform:
GPL16791
Series:
GSE57278
Download data: BEDGRAPH
Sample
Accession:
GSM1486177
ID:
301486177

SRA Run Selector

8.

PTBP1-PAR-iCLIP

Organism:
Homo sapiens
Source name:
293T
Platform:
GPL16791
Series:
GSE57278
Download data: BEDGRAPH
Sample
Accession:
GSM1378377
ID:
301378377

SRA Run Selector

9.

nSR100 PAR-iCLIP rep3

Organism:
Homo sapiens
Source name:
293T, dox-inducible
Platform:
GPL16791
Series:
GSE57278
Download data
Sample
Accession:
GSM1378376
ID:
301378376

SRA Run Selector

10.

nSR100 PAR-iCLIP rep2

Organism:
Homo sapiens
Source name:
293T, dox-inducible
Platform:
GPL16791
Series:
GSE57278
Download data
Sample
Accession:
GSM1378375
ID:
301378375

SRA Run Selector

11.

nSR100 PAR-iCLIP rep1

Organism:
Homo sapiens
Source name:
293T, dox-inducible
Platform:
GPL16791
Series:
GSE57278
Download data
Sample
Accession:
GSM1378374
ID:
301378374

SRA Run Selector

12.

293T_nSR100

Organism:
Homo sapiens
Source name:
293T, nSR100 overexpression
Platform:
GPL11154
Series:
GSE57278
Download data: TXT
Sample
Accession:
GSM1378373
ID:
301378373

SRA Run Selector

13.

293T_Ctrl

Organism:
Homo sapiens
Source name:
293T, control
Platform:
GPL11154
Series:
GSE57278
Download data: TXT
Sample
Accession:
GSM1378372
ID:
301378372

SRA Run Selector

14.

nSR100-PAR-iCLIP-mm_rep2

Organism:
Mus musculus
Source name:
N2A, dox-inducible
Platform:
GPL17021
Series:
GSE57278
Download data: BEDGRAPH
Sample
Accession:
GSM1486176
ID:
301486176

SRA Run Selector

15.

nSR100-PAR-iCLIP-mm_rep1

Organism:
Mus musculus
Source name:
N2A, dox-inducible
Platform:
GPL17021
Series:
GSE57278
Download data: BEDGRAPH
Sample
Accession:
GSM1486175
ID:
301486175

SRA Run Selector

16.

nSR100-iCLIP-mm

Organism:
Mus musculus
Source name:
N2A, dox-inducible
Platform:
GPL17021
Series:
GSE57278
Download data: BEDGRAPH
Sample
Accession:
GSM1486174
ID:
301486174

SRA Run Selector

17.

U2af65-PAR-iCLIP_nSR100-KD

Organism:
Mus musculus
Source name:
N2A, nSR100 depleted
Platform:
GPL17021
Series:
GSE57278
Download data: BEDGRAPH
Sample
Accession:
GSM1378379
ID:
301378379

SRA Run Selector

18.

U2af65-PAR-iCLIP_Ctrl-KD

Organism:
Mus musculus
Source name:
N2A, control
Platform:
GPL17021
Series:
GSE57278
Download data: BEDGRAPH
Sample
Accession:
GSM1378378
ID:
301378378

SRA Run Selector

19.

N2A_siPtbp1_KD_b

Organism:
Mus musculus
Source name:
N2A, Ptbp1 depleted
Platform:
GPL17021
Series:
GSE57278
Download data: TXT
Sample
Accession:
GSM1378371
ID:
301378371

SRA Run Selector

20.

N2A_siCtrl_KD_b

Organism:
Mus musculus
Source name:
N2A, control
Platform:
GPL17021
Series:
GSE57278
Download data: TXT
Sample
Accession:
GSM1378370
ID:
301378370

SRA Run Selector

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