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Items: 1 to 20 of 32

1.

Calibrating ChIP-seq with nucleosomal internal standards to measure histone modification density genome-wide

(Submitter supplied) Despite serving as a central experimental technique in epigenetics research, chromatin immunoprecipitation (ChIP) suffers from several serious drawbacks: it is a relative measurement untethered to any external scale that obviates fair comparison amongst experiments; it employs antibody reagents that have differing affinity and specificity for target epitopes, which are in turn variable in abundance; and it is frequently not reproducible. more...
Organism:
Drosophila melanogaster; synthetic construct; Mus musculus; Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
4 related Platforms
27 Samples
Download data: BIGWIG
Series
Accession:
GSE60378
ID:
200060378

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2500 (synthetic construct)

Organism:
synthetic construct
54 Series
5348 Samples
Download data
Platform
Accession:
GPL19604
ID:
100019604

3.

Illumina HiSeq 2500 (Drosophila melanogaster)

Organism:
Drosophila melanogaster
917 Series
20188 Samples
Download data
Platform
Accession:
GPL17275
ID:
100017275

4.

Illumina HiSeq 2500 (Mus musculus)

Organism:
Mus musculus
10744 Series
292828 Samples
Download data
Platform
Accession:
GPL17021
ID:
100017021

5.

Illumina HiSeq 2500 (Homo sapiens)

Organism:
Homo sapiens
11813 Series
336528 Samples
Download data
Platform
Accession:
GPL16791
ID:
100016791

6.

Input_ICeChIP-seq_mESC-E14

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL17021
Series:
GSE60378
Download data
Sample
Accession:
GSM1565721
ID:
301565721

SRA Run Selector

7.

H3K79me2_ICeChIP-seq_mESC-E14

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL17021
Series:
GSE60378
Download data
Sample
Accession:
GSM1565720
ID:
301565720

SRA Run Selector

8.

H3K36me3_ICeChIP-seq_mESC-E14

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL17021
Series:
GSE60378
Download data
Sample
Accession:
GSM1565719
ID:
301565719

SRA Run Selector

9.

H3K27me3_ICeChIP-seq_mESC-E14

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL17021
Series:
GSE60378
Download data
Sample
Accession:
GSM1565718
ID:
301565718

SRA Run Selector

10.

H3K9me3_ICeChIP-seq_mESC-E14

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL17021
Series:
GSE60378
Download data
Sample
Accession:
GSM1565717
ID:
301565717

SRA Run Selector

11.

H3K4me3_ICeChIP-seq_mESC-E14

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL17021
Series:
GSE60378
Download data
Sample
Accession:
GSM1565716
ID:
301565716

SRA Run Selector

12.

Input_ICeCHIP-seq_mESC-E14_S2

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL17021
Series:
GSE60378
Download data
Sample
Accession:
GSM1482828
ID:
301482828

SRA Run Selector

13.

H3K4me3_ICeCHIP-seq_mESC-E14_S2

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL17021
Series:
GSE60378
Download data
Sample
Accession:
GSM1482827
ID:
301482827

SRA Run Selector

14.

Input_ICeCHIP-seq_mESC-E14_S1

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL17021
Series:
GSE60378
Download data
Sample
Accession:
GSM1482826
ID:
301482826

SRA Run Selector

15.

H3K4me3_ICeCHIP-seq_mESC-E14_S1

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL17021
Series:
GSE60378
Download data
Sample
Accession:
GSM1482825
ID:
301482825

SRA Run Selector

16.

Semi-synthetic Nucleosomes Sequencing

Organism:
synthetic construct
Source name:
Synthetic
Platform:
GPL19604
Series:
GSE60378
Download data
Sample
Accession:
GSM1482818
ID:
301482818

SRA Run Selector

17.

Barcoded DNA Sequencing

Organism:
synthetic construct
Source name:
Synthetic
Platform:
GPL19604
Series:
GSE60378
Download data
Sample
Accession:
GSM1482817
ID:
301482817

SRA Run Selector

18.

H4_ICeChIP-seq_HEK293

Organism:
Homo sapiens
Source name:
Cell culture
Platform:
GPL16791
Series:
GSE60378
Download data
Sample
Accession:
GSM1482824
ID:
301482824

SRA Run Selector

19.

H3_ICeChIP-seq_HEK293

Organism:
Homo sapiens
Source name:
Cell culture
Platform:
GPL16791
Series:
GSE60378
Download data
Sample
Accession:
GSM1482823
ID:
301482823

SRA Run Selector

20.

Input_ICeChIP-seq_HEK293_2

Organism:
Homo sapiens
Source name:
Cell culture
Platform:
GPL16791
Series:
GSE60378
Download data
Sample
Accession:
GSM1482822
ID:
301482822

SRA Run Selector

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