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Items: 4

1.

Analysis of transcription start sites from nascent RNA identifies a unified architecture of initiation at mammalian promoters and enhancers (GRO-seq)

(Submitter supplied) Despite the conventional distinction between promoters and enhancers, they share many features in mammals, including divergent transcription and similar modes of transcription factor (TF) binding. Here, we examine the architecture of transcription initiation genome-wide through comprehensive mapping of transcription start sites (TSSs) in human lymphoblastoid B-cell (GM12878) and chronic myelogenous leukemic (K562) tier 1, ENCODE cell lines using a nuclear run-on protocol called GRO-cap. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL11154
2 Samples
Download data: BIGWIG
Series
Accession:
GSE60454
ID:
200060454

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10425 Series
180579 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

3.

GM12878 GRO-seq

Organism:
Homo sapiens
Source name:
GM12878 cells
Platform:
GPL11154
Series:
GSE60454 GSE60456
Download data: BIGWIG
Sample
Accession:
GSM1480326
ID:
301480326

SRA Run Selector

4.

K562 GRO-seq

Organism:
Homo sapiens
Source name:
K562 cells
Platform:
GPL11154
Series:
GSE60454 GSE60456
Download data: BIGWIG
Sample
Accession:
GSM1480325
ID:
301480325

SRA Run Selector

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db=gds|term=GSE60454[Accession]|query=1|qty=2|blobid=MCID_667020e9909a3d46addb02a3|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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