GSE63525[Accession] - GEO DataSets - NCBI

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Select item 2000635251.

A three-dimensional map of the human genome at kilobase resolution reveals prinicples of chromatin looping

(Submitter supplied) We use in situ Hi-C to probe the three-dimensional architecture of genomes, constructing haploid and diploid maps of nine cell types. The densest, in human lymphoblastoid cells, contains 4.9 billion contacts, achieving 1-kilobase resolution. We find that genomes are partitioned into local domains, which are associated with distinct patterns of histone marks and segregate into six subcompartments. We identify ~10,000 loops. more...

Organism:: Homo sapiens; Mus musculus

Type:: Other

5 related Platforms
200 Samples

Download data: BED, HIC, RTF, TXT

Series

Accession:: GSE63525

ID:: 200063525

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000170212.

Illumina HiSeq 2500 (Mus musculus)

Organism:: Mus musculus

10746 Series
292846 Samples

Platform

Accession:: GPL17021

ID:: 100017021

Select item 1000167913.

Illumina HiSeq 2500 (Homo sapiens)

Organism:: Homo sapiens

11814 Series
336528 Samples

Platform

Accession:: GPL16791

ID:: 100016791

Select item 1000155204.

Illumina MiSeq (Homo sapiens)

Organism:: Homo sapiens

1124 Series
35832 Samples

Platform

Accession:: GPL15520

ID:: 100015520

Select item 1000131125.

Illumina HiSeq 2000 (Mus musculus)

Organism:: Mus musculus

8232 Series
187296 Samples

Platform

Accession:: GPL13112

ID:: 100013112

Select item 1000111546.

Illumina HiSeq 2000 (Homo sapiens)

Organism:: Homo sapiens

10406 Series
180377 Samples

Platform

Accession:: GPL11154

ID:: 100011154

Select item 3015516497.

Organism:: Mus musculus

Source name:: B-lymphoblasts

Platform:: GPL13112
Series:: GSE63525

Download data: HIC, TXT

Sample

Accession:: GSM1551649

ID:: 301551649

SRA Run Selector

Select item 3015516488.

Organism:: Mus musculus

Source name:: B-lymphoblasts

Platform:: GPL13112
Series:: GSE63525

Download data: HIC, TXT

Sample

Accession:: GSM1551648

ID:: 301551648

SRA Run Selector

Select item 3015517499.

Organism:: Homo sapiens

Source name:: B-lymphoblastoids

Platform:: GPL15520
Series:: GSE63525

Download data: TXT

Sample

Accession:: GSM1551749

ID:: 301551749

SRA Run Selector

Select item 30155174810.

Organism:: Homo sapiens

Source name:: B-lymphoblastoids

Platform:: GPL15520
Series:: GSE63525

Download data: TXT

Sample

Accession:: GSM1551748

ID:: 301551748

SRA Run Selector

Select item 30155174711.

Organism:: Homo sapiens

Source name:: B-lymphoblastoids

Platform:: GPL15520
Series:: GSE63525

Download data: TXT

Sample

Accession:: GSM1551747

ID:: 301551747

SRA Run Selector

Select item 30155174612.

Organism:: Homo sapiens

Source name:: B-lymphoblastoids

Platform:: GPL15520
Series:: GSE63525

Download data: HIC, TXT

Sample

Accession:: GSM1551746

ID:: 301551746

SRA Run Selector

Select item 30155174513.

Organism:: Homo sapiens

Source name:: B-lymphoblastoids

Platform:: GPL15520
Series:: GSE63525

Download data: HIC, TXT

Sample

Accession:: GSM1551745

ID:: 301551745

SRA Run Selector

Select item 30155174414.

Organism:: Homo sapiens

Source name:: B-lymphoblastoids

Platform:: GPL15520
Series:: GSE63525

Download data: HIC, TXT

Sample

Accession:: GSM1551744

ID:: 301551744

SRA Run Selector

Select item 30155174315.

Organism:: Homo sapiens

Source name:: B-lymphoblastoids

Platform:: GPL15520
Series:: GSE63525

Download data: HIC, TXT

Sample

Accession:: GSM1551743

ID:: 301551743

SRA Run Selector

Select item 30155174216.

Organism:: Homo sapiens

Source name:: B-lymphoblastoids

Platform:: GPL15520
Series:: GSE63525

Download data: HIC, TXT

Sample

Accession:: GSM1551742

ID:: 301551742

SRA Run Selector

Select item 30155174117.

Organism:: Homo sapiens

Source name:: B-lymphoblastoids

Platform:: GPL15520
Series:: GSE63525

Download data: HIC, TXT

Sample

Accession:: GSM1551741

ID:: 301551741

SRA Run Selector

Select item 30155174018.

Organism:: Homo sapiens

Source name:: B-lymphoblastoids

Platform:: GPL15520
Series:: GSE63525

Download data: HIC, TXT

Sample

Accession:: GSM1551740

ID:: 301551740

SRA Run Selector

Select item 30155173919.

Organism:: Homo sapiens

Source name:: B-lymphoblastoids

Platform:: GPL15520
Series:: GSE63525

Download data: HIC, TXT

Sample

Accession:: GSM1551739

ID:: 301551739

SRA Run Selector

Select item 30155173820.

Organism:: Homo sapiens

Source name:: B-lymphoblastoids

Platform:: GPL15520
Series:: GSE63525

Download data: HIC, TXT

Sample

Accession:: GSM1551738

ID:: 301551738

SRA Run Selector

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