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Items: 1 to 20 of 38

1.

Chemical Pull-Down Reveals Comprehensive and Dynamic Pseudouridylation in Mammalian Transcriptome

(Submitter supplied) Pseudouridine (Ψ) is the most abundant RNA modification, yet little is known about its content, dynamics and function in mRNA and ncRNA. Here, we perform quantitative MS analysis and develop CAP-seq for transcriptome-wide Ψ profiling. The unexpected high Ψ content (Ψ/U ratio: ~ 0.2% to 0.6%) indicates that pseudouridylation in mammalian mRNA is much more prevalent and comprehensive than previously believed. more...
Organism:
Mus musculus; Homo sapiens
Type:
Other
Platforms:
GPL11154 GPL17021 GPL16791
34 Samples
Download data: TXT
Series
Accession:
GSE63655
ID:
200063655

PubMed Similar studies SRA Run Selector

2.

Illumina HiSeq 2500 (Mus musculus)

Organism:
Mus musculus
10764 Series
293509 Samples
Download data
Platform
Accession:
GPL17021
ID:
100017021

3.

Illumina HiSeq 2500 (Homo sapiens)

Organism:
Homo sapiens
11830 Series
336732 Samples
Download data
Platform
Accession:
GPL16791
ID:
100016791

4.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10410 Series
180450 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

5.

Mouse_Liver_Pulldown_Rep2

Organism:
Mus musculus
Source name:
Mouse_Liver_Pulldown
Platform:
GPL17021
Series:
GSE63655
Download data: TXT
Sample
Accession:
GSM1554845
ID:
301554845

SRA Run Selector

6.

Mouse_Liver_Input_Rep2

Organism:
Mus musculus
Source name:
Mouse_Liver_Input
Platform:
GPL17021
Series:
GSE63655
Download data: TXT
Sample
Accession:
GSM1554844
ID:
301554844

SRA Run Selector

7.

Mouse_Liver_Pulldown_Rep1

Organism:
Mus musculus
Source name:
Mouse_Liver_Pulldown
Platform:
GPL17021
Series:
GSE63655
Download data: TXT
Sample
Accession:
GSM1554843
ID:
301554843

SRA Run Selector

8.

Mouse_Liver_Input_Rep1

Organism:
Mus musculus
Source name:
Mouse_Liver_Input
Platform:
GPL17021
Series:
GSE63655
Download data: TXT
Sample
Accession:
GSM1554842
ID:
301554842

SRA Run Selector

9.

Mouse_Brain_Pulldown_Rep2

Organism:
Mus musculus
Source name:
Mouse_Brain_Pulldown
Platform:
GPL17021
Series:
GSE63655
Download data: TXT
Sample
Accession:
GSM1554841
ID:
301554841

SRA Run Selector

10.

Mouse_Brain_Input_Rep2

Organism:
Mus musculus
Source name:
Mouse_Brain_Input
Platform:
GPL17021
Series:
GSE63655
Download data: TXT
Sample
Accession:
GSM1554840
ID:
301554840

SRA Run Selector

11.

Mouse_Brain_Pulldown_Rep1

Organism:
Mus musculus
Source name:
Mouse_Brain_Pulldown
Platform:
GPL17021
Series:
GSE63655
Download data: TXT
Sample
Accession:
GSM1554839
ID:
301554839

SRA Run Selector

12.

Mouse_Brain_Input_Rep1

Organism:
Mus musculus
Source name:
Mouse_Brain_Input
Platform:
GPL17021
Series:
GSE63655
Download data: TXT
Sample
Accession:
GSM1554838
ID:
301554838

SRA Run Selector

13.

H2O2_Pulldown_Rep2

Organism:
Homo sapiens
Source name:
H2O2_Pulldown
Platform:
GPL11154
Series:
GSE63655
Download data: TXT
Sample
Accession:
GSM1554829
ID:
301554829

SRA Run Selector

14.

H2O2_Input_Rep2

Organism:
Homo sapiens
Source name:
H2O2_Input
Platform:
GPL11154
Series:
GSE63655
Download data: TXT
Sample
Accession:
GSM1554828
ID:
301554828

SRA Run Selector

15.

H2O2_Pulldown_Rep1

Organism:
Homo sapiens
Source name:
H2O2_Pulldown
Platform:
GPL11154
Series:
GSE63655
Download data: TXT
Sample
Accession:
GSM1554827
ID:
301554827

SRA Run Selector

16.

H2O2_Input_Rep1

Organism:
Homo sapiens
Source name:
H2O2_Input
Platform:
GPL11154
Series:
GSE63655
Download data: TXT
Sample
Accession:
GSM1554826
ID:
301554826

SRA Run Selector

17.

HS_Pulldown_Rep2

Organism:
Homo sapiens
Source name:
HS_Pulldown
Platform:
GPL11154
Series:
GSE63655
Download data: TXT
Sample
Accession:
GSM1554825
ID:
301554825

SRA Run Selector

18.

HS_Input_Rep2

Organism:
Homo sapiens
Source name:
HS_Input
Platform:
GPL11154
Series:
GSE63655
Download data: TXT
Sample
Accession:
GSM1554824
ID:
301554824

SRA Run Selector

19.

HS_Pulldown_Rep1

Organism:
Homo sapiens
Source name:
HS_Pulldown
Platform:
GPL11154
Series:
GSE63655
Download data: TXT
Sample
Accession:
GSM1554823
ID:
301554823

SRA Run Selector

20.

KO_Pulldown_Rep2

Organism:
Homo sapiens
Source name:
KO_Pulldown
Platform:
GPL16791
Series:
GSE63655
Download data: TXT
Sample
Accession:
GSM1554837
ID:
301554837

SRA Run Selector

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