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Items: 8

1.

Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells (wtRNA-Seq)

(Submitter supplied) DNA methylation is an epigenetic mark thought to be robust to environmental perturbations on a short time scale. Here, we challenge that view by demonstrating that the infection of human dendritic cells with a live pathogenic bacteria is associated with rapid changes in methylation levels at thousands of loci. We performed an integrated analysis of data on genome-wide DNA methylation, histone mark patterns, chromatin accessibility, and gene expression, before and after infection. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL16791
6 Samples
Download data: BW, TXT
Series
Accession:
GSE64182
ID:
200064182

PubMed Full text in PMC Similar studies Analyze with GEO2RSRA Run Selector

2.

Illumina HiSeq 2500 (Homo sapiens)

Organism:
Homo sapiens
11814 Series
336528 Samples
Download data
Platform
Accession:
GPL16791
ID:
100016791

3.

DC_NI_rep3 [wtRNA-Seq]

Organism:
Homo sapiens
Source name:
Dendritic cells
Platform:
GPL16791
Series:
GSE64182 GSE64183
Download data: BW, TXT
Sample
Accession:
GSM1566002
ID:
301566002

SRA Run Selector

4.

DC_MTB_rep3 [wtRNA-Seq]

Organism:
Homo sapiens
Source name:
Dendritic cells
Platform:
GPL16791
Series:
GSE64182 GSE64183
Download data: BW, TXT
Sample
Accession:
GSM1566001
ID:
301566001

SRA Run Selector

5.

DC_NI_rep2 [wtRNA-Seq]

Organism:
Homo sapiens
Source name:
Dendritic cells
Platform:
GPL16791
Series:
GSE64182 GSE64183
Download data: BW, TXT
Sample
Accession:
GSM1566000
ID:
301566000

SRA Run Selector

6.

DC_MTB_rep2 [wtRNA-Seq]

Organism:
Homo sapiens
Source name:
Dendritic cells
Platform:
GPL16791
Series:
GSE64182 GSE64183
Download data: BW, TXT
Sample
Accession:
GSM1565999
ID:
301565999

SRA Run Selector

7.

DC_NI_rep1 [wtRNA-Seq]

Organism:
Homo sapiens
Source name:
Dendritic cells
Platform:
GPL16791
Series:
GSE64182 GSE64183
Download data: BW, TXT
Sample
Accession:
GSM1565998
ID:
301565998

SRA Run Selector

8.

DC_MTB_rep1 [wtRNA-Seq]

Organism:
Homo sapiens
Source name:
Dendritic cells
Platform:
GPL16791
Series:
GSE64182 GSE64183
Download data: BW, TXT
Sample
Accession:
GSM1565997
ID:
301565997

SRA Run Selector

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