GSE64223[Accession] - GEO DataSets - NCBI

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Select item 2000642231.

The activation of IL-1 induced enhancers depends on TAK1 kinase activity and NF-KB p65 [ChIP-Seq]

(Submitter supplied) The inflammatory gene response requires activation of the protein kinase TAK1, but it is currently unknown how TAK1-derived signals coordinate transcriptional programs in the genome. We determined the genome-wide binding of the TAK1-controlled NF-κB subunit p65 in relation to active enhancers and promoters of transcribed genes by ChIP-seq experiments. Out of 35,000 active enhancer regions, 410 H3K4me1-positive enhancers show interleukin (IL)-1-induced H3K27ac and p65 binding. more...

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL16791
24 Samples

Download data: BW

Series

Accession:: GSE64223

ID:: 200064223

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000167912.

Illumina HiSeq 2500 (Homo sapiens)

Organism:: Homo sapiens

11830 Series
336732 Samples

Platform

Accession:: GPL16791

ID:: 100016791

Select item 3015665683.

ChIP-seq analysis of PolII in KB cells (PolII 5Z +IL1)

Organism:: Homo sapiens

Source name:: KB cells

Platform:: GPL16791
Series:: GSE64223 GSE64224

Download data: BW

Sample

Accession:: GSM1566568

ID:: 301566568

SRA Run Selector

Select item 3015665674.

ChIP-seq analysis of PolII in KB cells (PolII 5Z)

Organism:: Homo sapiens

Source name:: KB cells

Platform:: GPL16791
Series:: GSE64223 GSE64224

Download data: BW

Sample

Accession:: GSM1566567

ID:: 301566567

SRA Run Selector

Select item 3015665665.

ChIP-seq analysis of p65 in KB cells (p65 5Z IL1)

Organism:: Homo sapiens

Source name:: KB cells

Platform:: GPL16791
Series:: GSE64223 GSE64224

Download data: BW

Sample

Accession:: GSM1566566

ID:: 301566566

SRA Run Selector

Select item 3015665656.

ChIP-seq analysis of p65 in KB cells (p65 5Z)

Organism:: Homo sapiens

Source name:: KB cells

Platform:: GPL16791
Series:: GSE64223 GSE64224

Download data: BW

Sample

Accession:: GSM1566565

ID:: 301566565

SRA Run Selector

Select item 3015665647.

Sequencing of input (Input IL1 5Z)

Organism:: Homo sapiens

Source name:: KB cells

Platform:: GPL16791
Series:: GSE64223 GSE64224

Download data: BW

Sample

Accession:: GSM1566564

ID:: 301566564

SRA Run Selector

Select item 3015665638.

Sequencing of input (Input 5Z)

Organism:: Homo sapiens

Source name:: KB cells

Platform:: GPL16791
Series:: GSE64223 GSE64224

Download data: BW

Sample

Accession:: GSM1566563

ID:: 301566563

SRA Run Selector

Select item 3015665629.

Sequencing of input (Input)

Organism:: Homo sapiens

Source name:: KB cells

Platform:: GPL16791
Series:: GSE64223 GSE64224

Download data: BW

Sample

Accession:: GSM1566562

ID:: 301566562

SRA Run Selector

Select item 30156656110.

Sequencing of input (Input IL1)

Organism:: Homo sapiens

Source name:: KB cells

Platform:: GPL16791
Series:: GSE64223 GSE64224

Download data: BW

Sample

Accession:: GSM1566561

ID:: 301566561

SRA Run Selector

Select item 30156656011.

ChIP-seq analysis of H3K27Ac in KB cells (H3K27Ac IL1 5Z)

Organism:: Homo sapiens

Source name:: KB cells

Platform:: GPL16791
Series:: GSE64223 GSE64224

Download data: BW

Sample

Accession:: GSM1566560

ID:: 301566560

SRA Run Selector

Select item 30156655912.

ChIP-seq analysis of H3K27Ac in KB cells (H3K27Ac 5Z)

Organism:: Homo sapiens

Source name:: KB cells

Platform:: GPL16791
Series:: GSE64223 GSE64224

Download data: BW

Sample

Accession:: GSM1566559

ID:: 301566559

SRA Run Selector

Select item 30156655813.

ChIP-seq analysis of H3K27Ac in KB cells (H3K27Ac)

Organism:: Homo sapiens

Source name:: KB cells

Platform:: GPL16791
Series:: GSE64223 GSE64224

Download data: BW

Sample

Accession:: GSM1566558

ID:: 301566558

SRA Run Selector

Select item 30156655714.

ChIP-seq analysis of H3K27Ac in KB cells (H3K27Ac IL1)

Organism:: Homo sapiens

Source name:: KB cells

Platform:: GPL16791
Series:: GSE64223 GSE64224

Download data: BW

Sample

Accession:: GSM1566557

ID:: 301566557

SRA Run Selector

Select item 30156655615.

ChIP-seq analysis of H3K4me1 in KB cells (H3K4me1 IL1 5Z)

Organism:: Homo sapiens

Source name:: KB cells

Platform:: GPL16791
Series:: GSE64223 GSE64224

Download data: BW

Sample

Accession:: GSM1566556

ID:: 301566556

SRA Run Selector

Select item 30156655516.

ChIP-seq analysis of H3K4me1 in KB cells (H3K4me1 5Z)

Organism:: Homo sapiens

Source name:: KB cells

Platform:: GPL16791
Series:: GSE64223 GSE64224

Download data: BW

Sample

Accession:: GSM1566555

ID:: 301566555

SRA Run Selector

Select item 30156655417.

ChIP-seq analysis of H3K4me1 in KB cells (H3K4me1)

Organism:: Homo sapiens

Source name:: KB cells

Platform:: GPL16791
Series:: GSE64223 GSE64224

Download data: BW

Sample

Accession:: GSM1566554

ID:: 301566554

SRA Run Selector

Select item 30156655318.

ChIP-seq analysis of H3K4me1 in KB cells (H3K4me1 IL1)

Organism:: Homo sapiens

Source name:: KB cells

Platform:: GPL16791
Series:: GSE64223 GSE64224

Download data: BW

Sample

Accession:: GSM1566553

ID:: 301566553

SRA Run Selector

Select item 30156655219.

ChIP-seq analysis of PolII in KB cells (p(S5) PolII IL1 5Z)

Organism:: Homo sapiens

Source name:: KB cells

Platform:: GPL16791
Series:: GSE64223 GSE64224

Download data: BW

Sample

Accession:: GSM1566552

ID:: 301566552

SRA Run Selector

Select item 30156655120.

ChIP-seq analysis of PolII in KB cells (p(S5) PolII 5Z)

Organism:: Homo sapiens

Source name:: KB cells

Platform:: GPL16791
Series:: GSE64223 GSE64224

Download data: BW

Sample

Accession:: GSM1566551

ID:: 301566551

SRA Run Selector

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