GSE66023[Accession] - GEO DataSets - NCBI

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Items: 14

Select item 2000660231.

Histone H3 globular domain acetylation identifies new class of enhancers

(Submitter supplied) We report the acetylation of lysine residues in the globular domain of H3 (H3K64ac and H3K122ac) marks active gene promoters and also a subset of active enhancers in mouse embryonic stem cells (mESCs), human erythroleukemic cell line (K562). Moreover, we find a novel class of active functional enhancers in ESCs that are marked by H3K122ac but which lack H3K27ac. This work suggests that a more complex analysis of histone acetylation is required to identify enhancers than was previously considered.

Organism:: Homo sapiens; Mus musculus

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platforms:: GPL13112 GPL16791 GPL17021
10 Samples

Download data: BED, BEDGRAPH

Series

Accession:: GSE66023

ID:: 200066023

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000170212.

Illumina HiSeq 2500 (Mus musculus)

Organism:: Mus musculus

10753 Series
293063 Samples

Platform

Accession:: GPL17021

ID:: 100017021

Select item 1000167913.

Illumina HiSeq 2500 (Homo sapiens)

Organism:: Homo sapiens

11829 Series
336719 Samples

Platform

Accession:: GPL16791

ID:: 100016791

Select item 1000131124.

Illumina HiSeq 2000 (Mus musculus)

Organism:: Mus musculus

8233 Series
187304 Samples

Platform

Accession:: GPL13112

ID:: 100013112

Select item 3020546915.

46c_H3K64ac_rep1

Organism:: Mus musculus

Source name:: 46c_H3K64ac

Platform:: GPL13112
Series:: GSE66023

Sample

Accession:: GSM2054691

ID:: 302054691

SRA Run Selector

Select item 3020546896.

46c_H3K122ac_rep1

Organism:: Mus musculus

Source name:: 46c_H3K122ac

Platform:: GPL13112
Series:: GSE66023

Sample

Accession:: GSM2054689

ID:: 302054689

SRA Run Selector

Select item 3020546947.

46c_H3K27ac_rep2

Organism:: Mus musculus

Source name:: 46c_H3K27ac

Platform:: GPL17021
Series:: GSE66023

Sample

Accession:: GSM2054694

ID:: 302054694

SRA Run Selector

Select item 3020546938.

46c_H3K27ac_rep1

Organism:: Mus musculus

Source name:: 46c_H3K27ac

Platform:: GPL17021
Series:: GSE66023

Sample

Accession:: GSM2054693

ID:: 302054693

SRA Run Selector

Select item 3020546929.

46c_H3K64ac_rep2

Organism:: Mus musculus

Source name:: 46c_H3K64ac

Platform:: GPL17021
Series:: GSE66023

Sample

Accession:: GSM2054692

ID:: 302054692

SRA Run Selector

Select item 30205469010.

46c_H3K122ac_rep2

Organism:: Mus musculus

Source name:: 46c_H3K122ac

Platform:: GPL17021
Series:: GSE66023

Sample

Accession:: GSM2054690

ID:: 302054690

SRA Run Selector

Select item 30205469811.

Organism:: Homo sapiens

Source name:: K562_Input

Platform:: GPL16791
Series:: GSE66023

Sample

Accession:: GSM2054698

ID:: 302054698

SRA Run Selector

Select item 30205469712.

Organism:: Homo sapiens

Source name:: K562_H3K4me1

Platform:: GPL16791
Series:: GSE66023

Download data: BED, BEDGRAPH

Sample

Accession:: GSM2054697

ID:: 302054697

SRA Run Selector

Select item 30205469613.

Organism:: Homo sapiens

Source name:: K562_H3K27ac

Platform:: GPL16791
Series:: GSE66023

Download data: BED, BEDGRAPH

Sample

Accession:: GSM2054696

ID:: 302054696

SRA Run Selector

Select item 30205469514.

Organism:: Homo sapiens

Source name:: K562_H3K122ac

Platform:: GPL16791
Series:: GSE66023

Download data: BED, BEDGRAPH

Sample

Accession:: GSM2054695

ID:: 302054695

SRA Run Selector

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