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Items: 19

1.

Cockayne syndrome A and B proteins regulate the transcription arrest upon genotoxic stress through a ubiquitin/proteasome degradation process (ChIP-seq)

(Submitter supplied) The rare genetic disease Cockayne syndrome (CS) results in mutations in CSA and CSB. Upon UV irradiation, RNA synthesis was arrested: RNA-seq showed 70% of down-regulated genes in common between CSA and CSB deficient cells. ATF3, the product of an immediate early gene was overexpressed and bound to its CRE/ATF site to inhibit its responsive genes. ChIP experiments showed that CSA/CUL4A/DDB1 together with CSB and MDM2, target ATF3. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL20301
17 Samples
Download data: XLSX
Series
Accession:
GSE87562
ID:
200087562

PubMed Similar studies SRA Run Selector

2.

Illumina HiSeq 4000 (Homo sapiens)

Organism:
Homo sapiens
9275 Series
214503 Samples
Download data
Platform
Accession:
GPL20301
ID:
100020301

3.

Input

Organism:
Homo sapiens
Source name:
CS1AN+CSBwt
Platform:
GPL20301
Series:
GSE87562 GSE87564
Download data
Sample
Accession:
GSM2333828
ID:
302333828

SRA Run Selector

4.

CSA_WT_8h

Organism:
Homo sapiens
Source name:
CS1AN+CSBwt
Platform:
GPL20301
Series:
GSE87562 GSE87564
Download data
Sample
Accession:
GSM2333827
ID:
302333827

SRA Run Selector

5.

CSA_WT_0h

Organism:
Homo sapiens
Source name:
CS1AN+CSBwt
Platform:
GPL20301
Series:
GSE87562 GSE87564
Download data
Sample
Accession:
GSM2333826
ID:
302333826

SRA Run Selector

6.

PSMB5_8h

Organism:
Homo sapiens
Source name:
CS1AN+CSBwt
Platform:
GPL20301
Series:
GSE87562 GSE87564
Download data
Sample
Accession:
GSM2333825
ID:
302333825

SRA Run Selector

7.

PSMD1_8h

Organism:
Homo sapiens
Source name:
CS1AN+CSBwt
Platform:
GPL20301
Series:
GSE87562 GSE87564
Download data
Sample
Accession:
GSM2333824
ID:
302333824

SRA Run Selector

8.

CSB_WT_8h

Organism:
Homo sapiens
Source name:
CS1AN+CSBwt
Platform:
GPL20301
Series:
GSE87562 GSE87564
Download data
Sample
Accession:
GSM2333823
ID:
302333823

SRA Run Selector

9.

CSB_WT_0h

Organism:
Homo sapiens
Source name:
CS1AN+CSBwt
Platform:
GPL20301
Series:
GSE87562 GSE87564
Download data
Sample
Accession:
GSM2333822
ID:
302333822

SRA Run Selector

10.

MDM2_WT_8h

Organism:
Homo sapiens
Source name:
CS1AN+CSBwt
Platform:
GPL20301
Series:
GSE87562 GSE87564
Download data
Sample
Accession:
GSM2333821
ID:
302333821

SRA Run Selector

11.

MDM2_WT_0h

Organism:
Homo sapiens
Source name:
CS1AN+CSBwt
Platform:
GPL20301
Series:
GSE87562 GSE87564
Download data
Sample
Accession:
GSM2333820
ID:
302333820

SRA Run Selector

12.

pol2_mut_24h

Organism:
Homo sapiens
Source name:
CS1AN
Platform:
GPL20301
Series:
GSE87562 GSE87564
Download data
Sample
Accession:
GSM2333819
ID:
302333819

SRA Run Selector

13.

pol2_WT_24h

Organism:
Homo sapiens
Source name:
CS1AN+CSBwt
Platform:
GPL20301
Series:
GSE87562 GSE87564
Download data
Sample
Accession:
GSM2333818
ID:
302333818

SRA Run Selector

14.

pol2_WT_8h

Organism:
Homo sapiens
Source name:
CS1AN+CSBwt
Platform:
GPL20301
Series:
GSE87562 GSE87564
Download data
Sample
Accession:
GSM2333817
ID:
302333817

SRA Run Selector

15.

pol2_WT_0h

Organism:
Homo sapiens
Source name:
CS1AN+CSBwt
Platform:
GPL20301
Series:
GSE87562 GSE87564
Download data
Sample
Accession:
GSM2333816
ID:
302333816

SRA Run Selector

16.

ATF3_mut_24h

Organism:
Homo sapiens
Source name:
CS1AN
Platform:
GPL20301
Series:
GSE87562 GSE87564
Download data
Sample
Accession:
GSM2333815
ID:
302333815

SRA Run Selector

17.

ATF3_WT_24h

Organism:
Homo sapiens
Source name:
CS1AN+CSBwt
Platform:
GPL20301
Series:
GSE87562 GSE87564
Download data
Sample
Accession:
GSM2333814
ID:
302333814

SRA Run Selector

18.

ATF3_WT_8h

Organism:
Homo sapiens
Source name:
CS1AN+CSBwt
Platform:
GPL20301
Series:
GSE87562 GSE87564
Download data
Sample
Accession:
GSM2333813
ID:
302333813

SRA Run Selector

19.

ATF3_WT_0h

Organism:
Homo sapiens
Source name:
CS1AN+CSBwt
Platform:
GPL20301
Series:
GSE87562 GSE87564
Download data
Sample
Accession:
GSM2333812
ID:
302333812

SRA Run Selector

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