GSE92882[Accession] - GEO DataSets - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Search results

Items: 20

Select item 2000928821.

Functional genomic analysis of the haploinsufficient tumor suppressor, CUX1

(Submitter supplied) CUX1 is a homeodomain-containing transcription factor that is conserved, ubiquitous, and essential in vertebrates and invertebrates. CUX1 is mutated or deleted in high-risk myeloid neoplasms and solid tumors, resulting in haploinsufficiency and tumor growth. Here we provide the first analysis of endogenous, whole genome, CUX1 DNA binding. We demonstrate that CUX1 binds with transcriptional activators and cohesin at distal enhancers across three different human cell types. more...

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing

Platforms:: GPL11154 GPL20301
17 Samples

Download data: TXT

Series

Accession:: GSE92882

ID:: 200092882

PubMed Full text in PMC Similar studies Analyze with GEO2R SRA Run Selector

Select item 1000203012.

Illumina HiSeq 4000 (Homo sapiens)

Organism:: Homo sapiens

8771 Series
200001 Samples

Platform

Accession:: GPL20301

ID:: 100020301

Select item 1000111543.

Illumina HiSeq 2000 (Homo sapiens)

Organism:: Homo sapiens

10668 Series
185657 Samples

Platform

Accession:: GPL11154

ID:: 100011154

Select item 3024392404.

Control shRNA.rep2_ChIP-seq

Organism:: Homo sapiens

Source name:: K562_Control shRNA

Platform:: GPL11154
Series:: GSE92882

Sample

Accession:: GSM2439240

ID:: 302439240

SRA Run Selector

Select item 3024392395.

shCUX1-B.rep2_ChIP-seq

Organism:: Homo sapiens

Source name:: K562_shCUX1-B

Platform:: GPL11154
Series:: GSE92882

Sample

Accession:: GSM2439239

ID:: 302439239

SRA Run Selector

Select item 3024392386.

shCUX1-A.rep2_ChIP-seq

Organism:: Homo sapiens

Source name:: K562_shCUX1-A

Platform:: GPL11154
Series:: GSE92882

Sample

Accession:: GSM2439238

ID:: 302439238

SRA Run Selector

Select item 3024392377.

Input.rep2_ChIP-seq

Organism:: Homo sapiens

Source name:: K562_Input

Platform:: GPL11154
Series:: GSE92882

Sample

Accession:: GSM2439237

ID:: 302439237

SRA Run Selector

Select item 3024392368.

Control shRNA.rep1_ChIP-seq

Organism:: Homo sapiens

Source name:: K562_Control shRNA

Platform:: GPL11154
Series:: GSE92882

Sample

Accession:: GSM2439236

ID:: 302439236

SRA Run Selector

Select item 3024392359.

shCUX1-B.rep1_ChIP-seq

Organism:: Homo sapiens

Source name:: K562_shCUX1-B

Platform:: GPL11154
Series:: GSE92882

Sample

Accession:: GSM2439235

ID:: 302439235

SRA Run Selector

Select item 30243923410.

shCUX1-A.rep1_ChIP-seq

Organism:: Homo sapiens

Source name:: K562_shCUX1-A

Platform:: GPL11154
Series:: GSE92882

Sample

Accession:: GSM2439234

ID:: 302439234

SRA Run Selector

Select item 30243923311.

input.rep1_ChIP-seq

Organism:: Homo sapiens

Source name:: K562_input

Platform:: GPL11154
Series:: GSE92882

Sample

Accession:: GSM2439233

ID:: 302439233

SRA Run Selector

Select item 30243924912.

shCUX1.810.rep3_RNA-seq

Organism:: Homo sapiens

Source name:: K562_shCUX1.810

Platform:: GPL20301
Series:: GSE92882

Sample

Accession:: GSM2439249

ID:: 302439249

SRA Run Selector

Select item 30243924813.

shCUX1.338.rep3_RNA-seq

Organism:: Homo sapiens

Source name:: K562_shCUX1.338

Platform:: GPL20301
Series:: GSE92882

Sample

Accession:: GSM2439248

ID:: 302439248

SRA Run Selector

Select item 30243924714.

shRen.rep3_RNA-seq

Organism:: Homo sapiens

Source name:: K562_shRen

Platform:: GPL20301
Series:: GSE92882

Sample

Accession:: GSM2439247

ID:: 302439247

SRA Run Selector

Select item 30243924615.

shCUX1.810.rep2_RNA-seq

Organism:: Homo sapiens

Source name:: K562_shCUX1.810

Platform:: GPL20301
Series:: GSE92882

Sample

Accession:: GSM2439246

ID:: 302439246

SRA Run Selector

Select item 30243924516.

shCUX1.338.rep2_RNA-seq

Organism:: Homo sapiens

Source name:: K562_shCUX1.338

Platform:: GPL20301
Series:: GSE92882

Sample

Accession:: GSM2439245

ID:: 302439245

SRA Run Selector

Select item 30243924417.

shRen.rep2_RNA-seq

Organism:: Homo sapiens

Source name:: K562_shRen

Platform:: GPL20301
Series:: GSE92882

Sample

Accession:: GSM2439244

ID:: 302439244

SRA Run Selector

Select item 30243924318.

shCUX1.810.rep1_RNA-seq

Organism:: Homo sapiens

Source name:: K562_shCUX1.810

Platform:: GPL20301
Series:: GSE92882

Sample

Accession:: GSM2439243

ID:: 302439243

SRA Run Selector

Select item 30243924219.

shCUX1.338.rep1_RNA-seq

Organism:: Homo sapiens

Source name:: K562_shCUX1.338

Platform:: GPL20301
Series:: GSE92882

Sample

Accession:: GSM2439242

ID:: 302439242

SRA Run Selector

Select item 30243924120.

shRen.rep1_RNA-seq

Organism:: Homo sapiens

Source name:: K562_shRen

Platform:: GPL20301
Series:: GSE92882

Sample

Accession:: GSM2439241

ID:: 302439241

SRA Run Selector

Supplemental Content

Filters: Manage Filters

Find related data

Search details

Important Links

Recent activity

Clear Turn Off Turn On

GSE92882[Accession] (20)
GEO DataSets

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > Genes & Expression > Gene Expression Omnibus (GEO) Datasets