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Items: 4

1.

Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL9115 GPL11154
22 Samples
Download data: BED, BEDGRAPH
Series
Accession:
GSE47678
ID:
200047678
2.

Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition [RNA-Seq]

(Submitter supplied) Although the function of DNA methylation in gene promoter regions is well established in transcriptional repression, the function of the evolutionarily conserved widespread distribution of DNA methylation in gene body regions remains incompletely understood. Here, we show that DNA methylation is enriched in included alternatively spliced exons (ASEs) and inhibiting DNA methylation results in aberrant splicing of ASEs. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL9115 GPL11154
12 Samples
Download data: BED
3.

Illumina Genome Analyzer II (Homo sapiens)

Platform
Accession:
GPL9115
ID:
100009115
4.

HCT116_DKO_GA2067_RNAseq

Organism:
Homo sapiens
Source name:
HCT116 cells expressing hypomorphic DNMT1 and lack DNMT3b (HCT116-DKO)
Platform:
GPL9115
Series:
GSE47488 GSE47678
Download data: BED
Sample
Accession:
GSM1151051
ID:
301151051
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Supplemental Content

db=gds|term=GSM1151051[Accession]|query=1|qty=2|blobid=MCID_66568931e795547e5fd52307|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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