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Items: 4

1.

A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequence Quality Control consortium

(Submitter supplied) We present primary results from the Sequencing Quality Control (SEQC) project, coordinated by the United States Food and Drug Administration. Examining Illumina HiSeq, Life Technologies SOLiD and Roche 454 platforms at multiple laboratory sites using reference RNA samples with built-in controls, we assess RNA sequencing (RNA-seq) performance for sequence discovery and differential expression profiling and compare it to microarray and quantitative PCR (qPCR) data using complementary metrics. more...
Organism:
synthetic construct; Homo sapiens
Type:
Expression profiling by high throughput sequencing
5 related Platforms
3396 Samples
Download data: TXT
Series
Accession:
GSE47774
ID:
200047774
2.

SEQC Project

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Rattus norvegicus; synthetic construct; Homo sapiens
Type:
Expression profiling by array; Expression profiling by high throughput sequencing
15 related Platforms
4521 Samples
Download data: CEL, TXT
Series
Accession:
GSE47792
ID:
200047792
3.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
4.

SEQC_ILM_CNL_A_3_L08_GATCAG_AD0FD7ACXX

Organism:
Homo sapiens
Source name:
Universal Human Reference RNA (UHRR) from Stratagene
Platform:
GPL11154
Series:
GSE47774 GSE47792
Download data
Sample
Accession:
GSM1157224
ID:
301157224
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db=gds|term=GSM1157224[Accession]|query=1|qty=4|blobid=MCID_664fc8e1faf6612e8f418a00|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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