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Items: 3

1.

Differential Protein Occupancy Profiling of the mRNA Transcriptome

(Submitter supplied) Protein-RNA interactions are fundamental to core biological processes, such as mRNA splicing, localization, degradation and translation. We have developed a photoreactive nucleotide-enhanced UV crosslinking and oligo(dT) purification approach to identify the mRNA-bound proteome using quantitative proteomics and to display the protein occupancy on mRNA transcripts by next-generation sequencing (Baltz and Munschauer et al. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL16791 GPL11154
10 Samples
Download data: BEDGRAPH, TXT
Series
Accession:
GSE49831
ID:
200049831

PubMed Full text in PMC Similar studies Analyze with GEO2RSRA Run Selector

2.

Illumina HiSeq 2500 (Homo sapiens)

Organism:
Homo sapiens
11813 Series
336528 Samples
Download data
Platform
Accession:
GPL16791
ID:
100016791

3.

HEK293 total RNA

Organism:
Homo sapiens
Source name:
HEK293 cell culture
Platform:
GPL16791
Series:
GSE49831
Download data
Sample
Accession:
GSM1269466
ID:
301269466

SRA Run Selector

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db=gds|term=GSM1269466[Accession]|query=1|qty=2|blobid=MCID_66493cfa3844a3792a430d99|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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