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Items: 4

1.

Emergence of neural crest identity is a key early step in melanoma formation [ChIP-Seq]

(Submitter supplied) The “cancerized field” concept posits that cells of a given tissue share a potentially oncogenic mutation or insult and are thus cancer-prone, yet only discreet clones within the field initiate tumor formation. In melanoma, tumors frequently (~50%) carry the oncogenic BRAFV600E mutation that is also nearly always present in benign nevi that rarely become melanoma. The zebrafish crestin gene is expressed embryonically in neural crest progenitors and is then specifically re-expressed in melanoma tumors. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL16791
2 Samples
Download data: BW
Series
Accession:
GSE61825
ID:
200061825
2.

A zebrafish melanoma model reveals emergence of neural crest identity during melanoma initiation

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Danio rerio; Homo sapiens
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other; Expression profiling by array
4 related Platforms
48 Samples
Download data: BW, NARROWPEAK
Series
Accession:
GSE75356
ID:
200075356
3.

Illumina HiSeq 2500 (Homo sapiens)

Platform
Accession:
GPL16791
ID:
100016791
4.

H3k27ac ChIP on DMSO-treated cells

Organism:
Homo sapiens
Source name:
A375 melanoma cell line
Platform:
GPL16791
Series:
GSE61825 GSE75356
Download data: BW
Sample
Accession:
GSM1515414
ID:
301515414
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db=gds|term=GSM1515414[Accession]|query=1|qty=3|blobid=MCID_667089b5ce9c6e4cac2ca51a|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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