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Items: 4

1.

Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
Platforms:
GPL16791 GPL11154
62 Samples
Download data: BW, TXT
Series
Accession:
GSE64183
ID:
200064183
2.

Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells (ChIP-Seq)

(Submitter supplied) DNA methylation is an epigenetic mark thought to be robust to environmental perturbations on a short time scale. Here, we challenge that view by demonstrating that the infection of human dendritic cells with a live pathogenic bacteria is associated with rapid changes in methylation levels at thousands of loci. We performed an integrated analysis of data on genome-wide DNA methylation, histone mark patterns, chromatin accessibility, and gene expression, before and after infection. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL11154
28 Samples
Download data: BW
Series
Accession:
GSE64175
ID:
200064175
3.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
4.

DC_MTB_H3K9me3_rep2 (ChIP-Seq)

Organism:
Homo sapiens
Source name:
Monocyte-derived dendritic cells
Platform:
GPL11154
Series:
GSE64175 GSE64183
Download data: BW
Sample
Accession:
GSM1565806
ID:
301565806
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