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Items: 3

1.

A simple method for generating high-resolution maps of genome wide protein binding

(Submitter supplied) Chromatin immunoprecipitation (ChIP) and its derivatives are the main techniques used to determine transcription factor binding sites. However, conventional ChIP with sequencing (ChIP-seq) has problems with poor resolution and newer techniques require significant experimental alterations and complex bioinformatics. Here we build upon our high-resolution crosslinking ChIP-seq (X-ChIP-seq) method and compare it to existing methodologies. more...
Organism:
Drosophila melanogaster; Homo sapiens; Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL17021 GPL16791 GPL17275
5 Samples
Download data: BED, WIG
Series
Accession:
GSE67454
ID:
200067454
2.

Illumina HiSeq 2500 (Homo sapiens)

Platform
Accession:
GPL16791
ID:
100016791
3.

Hs_CTCF_X_ChIP_(20141204_25)

Organism:
Homo sapiens
Source name:
Crosslinked MNase digested chromatin
Platform:
GPL16791
Series:
GSE67454
Download data: BED, WIG
Sample
Accession:
GSM1647363
ID:
301647363
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