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Items: 3

1.

Measure transcript integrity using RNA-seq data

(Submitter supplied) Achieved biospecimens annotated with patient clinical characteristics are unique resources for translational research. However, RNA extracted from the achieved tissues is often degraded. RNA degradation can have a significant impact on the measure of transcript abundance that can lead to an increase rate of erroneous differentially expressed genes. Here, we are presenting the transcript integrity number (TIN) algorithm to measure the RNA degradation at transcript level. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL16791
20 Samples
Download data: TSV
Series
Accession:
GSE70285
ID:
200070285

PubMed Full text in PMC Similar studies Analyze with GEO2RSRA Run Selector

2.

Illumina HiSeq 2500 (Homo sapiens)

Organism:
Homo sapiens
11886 Series
340700 Samples
Download data
Platform
Accession:
GPL16791
ID:
100016791

3.

EX148171_V1N

Organism:
Homo sapiens
Source name:
Prostate cancer (Bone metastasis)
Platform:
GPL16791
Series:
GSE70285
Download data: TSV
Sample
Accession:
GSM1722944
ID:
301722944

SRA Run Selector

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db=gds|term=GSM1722944[Accession]|query=1|qty=2|blobid=MCID_66707376ce9c6e4cac2a577c|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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